Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 Z95331.1-201ENST00000623075 23112 ntBASIC5.68□□□□□ -1.5
NOD1Q9Y239 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 AC100757.1-201ENST00000616872 1835 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NOD1Q9Y239 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NOD1Q9Y239 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NOD1Q9Y239 RN7SKP113-201ENST00000363891 295 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 SNORD14.1-201ENST00000365609 90 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NOD1Q9Y239 Y_RNA.447-201ENST00000384184 113 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 RNU6-713P-201ENST00000384761 107 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 GLULP6-201ENST00000399502 913 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 MIR1252-201ENST00000408861 65 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 AL133482.1-201ENST00000415988 498 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 RN7SL459P-201ENST00000481078 302 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 AC011005.2-201ENST00000487324 359 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 RNU6-408P-201ENST00000515910 100 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NOD1Q9Y239 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 RPL23AP87-202ENST00000573039 466 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 MIR3667-201ENST00000581025 74 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 MIR4697-201ENST00000582977 78 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 AC105254.2-201ENST00000603636 436 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 MIR7641-1-201ENST00000627518 61 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NOD1Q9Y239 AL450326.2-201ENST00000421913 1962 ntBASIC5.67□□□□□ -1.5
NOD1Q9Y239 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NOD1Q9Y239 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.67□□□□□ -1.5
NOD1Q9Y239 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 AP000432.2-201ENST00000624164 2048 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 MTND5P7-201ENST00000413558 1798 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 Y_RNA.288-201ENST00000364854 92 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 RNU6-398P-201ENST00000384143 109 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 SNORA70E-201ENST00000384492 135 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 AL603908.1-201ENST00000406098 201 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 RPL7AP73-201ENST00000413490 353 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 BX276092.3-201ENST00000424182 230 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 AL590399.2-201ENST00000427536 309 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 HMGB1P9-201ENST00000429856 646 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 HMGB1P27-201ENST00000431429 603 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AL590399.6-201ENST00000446396 307 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 PRDX3P3-201ENST00000447765 522 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC108860.1-201ENST00000484521 383 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 CR383656.1-201ENST00000484916 377 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 RPL17P19-201ENST00000489069 552 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 MRPS33P2-201ENST00000507850 322 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 SNORD116-26-201ENST00000516006 96 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC007991.1-201ENST00000522680 631 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC008489.1-201ENST00000524271 483 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC107918.3-201ENST00000533272 382 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC093227.2-201ENST00000589357 285 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC016727.2-201ENST00000603988 621 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 U73479.1-201ENST00000618062 168 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC078938.1-201ENST00000620993 318 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AL031601.2-202ENST00000622650 282 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 AP000346.3-201ENST00000622821 210 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
NOD1Q9Y239 AC139769.1-204ENST00000472297 1931 ntBASIC5.66□□□□□ -1.5
NOD1Q9Y239 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NOD1Q9Y239 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
NOD1Q9Y239 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NOD1Q9Y239 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NOD1Q9Y239 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NOD1Q9Y239 SAMMSON-213ENST00000641336 1521 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 AC006206.1-201ENST00000544842 3387 ntBASIC5.65□□□□□ -1.5
NOD1Q9Y239 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms