Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 MTND4LP10-201ENST00000435146 291 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 RPL7P28-201ENST00000437739 740 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 LARP1BP2-201ENST00000486594 519 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 TRBV12-2-201ENST00000489763 344 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 RNU6-720P-201ENST00000516363 108 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AP003392.2-201ENST00000527269 208 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 DEFB131E-202ENST00000602581 683 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AC091805.2-201ENST00000603848 235 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AL359999.1-201ENST00000604513 294 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AC087241.4-201ENST00000612441 480 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 Z99129.1-201ENST00000612510 255 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AC068792.1-201ENST00000621354 417 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 AL603839.4-201ENST00000624658 1005 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 FAM35DP-201ENST00000323387 2712 ntBASIC5.57□□□□□ -1.52
CDK11AQ9UQ88 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 Y_RNA.111-201ENST00000363248 100 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 SNORA38.1-201ENST00000364172 131 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 DEFB109C-201ENST00000382575 264 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 DEFB109B-201ENST00000382656 264 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 RNU1-89P-201ENST00000384592 164 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 SNORD17-201ENST00000390930 237 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AL356421.1-201ENST00000403255 413 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 RN7SKP111-201ENST00000410349 271 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 HMGB3P20-201ENST00000417997 600 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 DBIP2-201ENST00000419076 262 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AL445669.1-201ENST00000426743 755 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC087650.1-201ENST00000431445 468 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 ATP5HP2-201ENST00000433885 485 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 BTF3P5-201ENST00000457252 467 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 U3.44-201ENST00000458938 192 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC025518.1-201ENST00000479856 347 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC021146.1-201ENST00000511202 716 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 RN7SKP298-201ENST00000515950 94 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 MIR2114-201ENST00000516645 80 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC112191.3-201ENST00000604371 277 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC109347.2-201ENST00000610220 349 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC005332.10-201ENST00000612725 619 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AL596245.1-201ENST00000618994 362 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 MIR8057-201ENST00000620957 69 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC092447.7-201ENST00000422212 1621 ntBASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK11AQ9UQ88 AC007256.1-201ENST00000392253 2765 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 Y_RNA.599-201ENST00000410489 109 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC092447.6-201ENST00000414578 210 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 OR1AA1P-201ENST00000419597 916 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC007742.1-201ENST00000425789 329 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 ELOCP26-201ENST00000436067 329 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 MTCO1P42-201ENST00000457379 726 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 HMGB1P36-201ENST00000487709 576 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 MTND1P15-201ENST00000579262 949 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 U6.98-201ENST00000637157 84 ntBASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDK11AQ9UQ88 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms