Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-1020P-201ENST00000363684 107 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.261-201ENST00000364631 102 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.586-201ENST00000391146 98 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 U3.32-201ENST00000408116 212 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RPS29P10-201ENST00000439197 166 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AP001992.1-205ENST00000462248 379 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RN7SL189P-201ENST00000468631 289 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RPL23AP41-201ENST00000484754 458 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 IGLV2-34-201ENST00000490007 283 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AP001086.1-201ENST00000494882 321 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RPL7P47-201ENST00000497299 556 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-1338P-201ENST00000516328 91 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AC034114.1-201ENST00000520293 285 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 HIGD1AP6-201ENST00000521833 279 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 HSPE1P3-201ENST00000559254 309 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 MIR4675-201ENST00000577898 77 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 MAGOH2P-202ENST00000584384 429 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AC006254.2-201ENST00000603259 279 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 AL161423.1-201ENST00000613700 262 ntBASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PDZRN3Q9UPQ7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC019155.1-201ENST00000382242 574 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.626-201ENST00000411288 95 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AL139095.3-201ENST00000419672 1203 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 RPL23AP43-201ENST00000446445 471 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC073264.2-201ENST00000448886 166 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AL935212.3-201ENST00000450729 284 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC079804.1-201ENST00000461922 436 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 RN7SL459P-201ENST00000481078 302 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 RPL17P19-201ENST00000489069 552 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC140059.1-201ENST00000489238 361 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC074133.1-201ENST00000515696 183 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 SNORA70.11-201ENST00000515987 138 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 SNORA70.13-201ENST00000516116 138 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AP006289.1-201ENST00000538089 277 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 DYNLL1P4-201ENST00000549314 266 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 MIR4284-201ENST00000578924 81 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AC091042.1-201ENST00000579213 173 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 AL512782.1-201ENST00000603093 364 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 IRF5P1-201ENST00000504852 2164 ntBASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.49□□□□□ -1.37
PDZRN3Q9UPQ7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 SNORD81.1-201ENST00000363064 77 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 RNA5SP90-201ENST00000364801 99 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 RNA5SP428-201ENST00000365129 132 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 RNA5SP223-201ENST00000365174 120 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 RNU6-641P-201ENST00000384006 107 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 RNU1-74P-201ENST00000384108 171 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 Y_RNA.568-201ENST00000384742 113 ntBASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDZRN3Q9UPQ7 AL445189.1-201ENST00000405722 338 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms