Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RPL7P25-201ENST00000404151 721 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 USP9YP33-201ENST00000412220 421 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC104332.2-201ENST00000429959 156 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 USP9YP35-201ENST00000435696 412 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 MTND1P31-201ENST00000449206 961 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC092155.2-201ENST00000454675 477 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 MEMO1P3-201ENST00000459811 302 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 RNU6-798P-201ENST00000516912 103 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 MIR4513-201ENST00000581077 86 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AL138880.2-201ENST00000616214 239 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC091046.2-201ENST00000620775 665 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC005858.4-201ENST00000623191 700 ntBASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NPIPA1Q9UND3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC091564.4-201ENST00000533934 2194 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 ZNF29P-201ENST00000225587 168 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 MIR148B-201ENST00000362252 99 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 RNU6-97P-201ENST00000363387 104 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 SNORA46-201ENST00000384762 135 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 MIR1289-1-201ENST00000408836 144 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 NANOGP5-201ENST00000424456 877 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 MTCO2P23-201ENST00000425216 680 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 ZYG11AP1-201ENST00000430329 837 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 RPS25P9-201ENST00000435591 252 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC009969.1-201ENST00000438726 172 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 RPS12P18-201ENST00000442381 270 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 PTENP1-201ENST00000447117 1215 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 HSPE1P6-201ENST00000479457 291 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC134050.1-201ENST00000495088 933 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 UBE2V1P12-201ENST00000503954 474 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC119751.4-201ENST00000507498 357 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 SNORA31.22-201ENST00000517204 135 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 COX6CP8-201ENST00000522620 226 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AP000867.2-201ENST00000532468 320 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC090695.1-201ENST00000561269 1222 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC245297.2-201ENST00000610119 565 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC131902.3-201ENST00000611767 581 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 AC090617.7-201ENST00000623952 126 ntBASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPIPA1Q9UND3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 AL161781.1-201ENST00000354277 403 ntBASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 RNU6-1242P-201ENST00000391052 103 ntBASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 MIR1290-201ENST00000408735 78 ntBASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 SDCBPP3-201ENST00000419629 891 ntBASIC2.76□□□□□ -1.97
NPIPA1Q9UND3 AL953862.1-201ENST00000423016 168 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms