Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-1155P-201ENST00000363554 107 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 RNU6-289P-201ENST00000364093 107 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 RPS12P18-201ENST00000442381 270 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AL513328.1-201ENST00000446460 224 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AL136097.1-201ENST00000456945 913 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 HMGN1P18-201ENST00000457642 277 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AC010401.1-201ENST00000463867 348 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 RN7SL20P-201ENST00000488827 297 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 ARL2BPP6-201ENST00000512757 439 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AC138761.3-201ENST00000579993 334 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.69□□□□□ -1.5
SHROOM4Q9ULL8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 RNU6-859P-201ENST00000362728 107 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 DEFB109C-201ENST00000382575 264 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 DEFB109B-201ENST00000382656 264 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 MIR504-201ENST00000385065 83 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 MIR34A-201ENST00000385130 110 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 MIR9-1-201ENST00000385198 89 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 AL356421.1-201ENST00000403255 413 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 PIGPP2-201ENST00000411569 458 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 MRPL50P2-201ENST00000416821 482 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 RNU1-61P-201ENST00000516107 151 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 MIR4425-201ENST00000580572 84 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 AC006254.3-201ENST00000603353 884 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 AC108206.1-201ENST00000570186 4159 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 AC104454.1-201ENST00000421341 1401 ntBASIC5.68□□□□□ -1.5
SHROOM4Q9ULL8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 MTCO1P9-201ENST00000505577 1534 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AC011477.1-204ENST00000623416 1325 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 RPL7P26-201ENST00000333817 754 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 RNA5SP293-201ENST00000410527 113 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AC234775.1-201ENST00000454247 670 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 RPL23AP31-201ENST00000456160 467 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AC112673.1-201ENST00000513168 575 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AP001330.4-201ENST00000604350 154 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AC090186.1-201ENST00000605991 572 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 AL607023.1-201ENST00000620045 248 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 SGO1P2-201ENST00000429458 1589 ntBASIC5.67□□□□□ -1.5
SHROOM4Q9ULL8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 SNORD6-201ENST00000365444 73 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 RNU6-253P-201ENST00000384730 105 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 MIR184-201ENST00000384962 84 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 RN7SKP192-201ENST00000411291 327 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 CCDC58P2-201ENST00000417131 366 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 AL662791.1-201ENST00000441992 928 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 MTCYBP43-201ENST00000513621 740 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 AL356596.1-201ENST00000624230 379 ntBASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SHROOM4Q9ULL8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 RNU6-359P-201ENST00000365466 108 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 RNU6-1200P-201ENST00000384162 107 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 TAS2R15P-201ENST00000390674 928 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 RNA5SP31-201ENST00000411144 127 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC004866.2-201ENST00000438285 481 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AL008629.1-201ENST00000438615 184 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC112653.1-201ENST00000443851 386 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 RN7SKP272-201ENST00000516988 232 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 SETP2-201ENST00000553886 926 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 OR4K8P-201ENST00000578842 1048 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC025946.2-201ENST00000603398 234 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC106028.5-201ENST00000610332 395 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC140725.3-201ENST00000616193 880 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC002550.2-201ENST00000621246 394 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 AC009039.2-201ENST00000624524 529 ntBASIC5.65□□□□□ -1.5
SHROOM4Q9ULL8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms