Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AL139132.1-201ENST00000431587 344 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 OR4K11P-201ENST00000431829 904 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 MTND1P32-201ENST00000433043 938 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC090774.1-201ENST00000435925 246 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 HMGB3P8-201ENST00000449709 577 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 MTND1P9-201ENST00000453775 944 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 ARPC3P2-201ENST00000457786 533 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 HMGB1P36-201ENST00000487709 576 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 RN7SL633P-201ENST00000488974 297 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC021146.5-201ENST00000503544 545 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC034244.1-201ENST00000507687 207 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 MTND1P24-201ENST00000552175 861 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC034268.2-201ENST00000571784 482 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AL451007.1-201ENST00000595491 289 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC015871.2-201ENST00000603605 948 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC008443.7-201ENST00000622195 246 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 AC021755.1-201ENST00000559747 1447 ntBASIC2.99□□□□□ -1.93
LHX3Q9UBR4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.99□□□□□ -1.93
LHX3Q9UBR4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 RNU6-777P-201ENST00000364265 104 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 RPS4XP3-201ENST00000398541 413 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 UBA52P6-201ENST00000399822 382 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 PIGPP2-201ENST00000411569 458 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 TMEM167AP1-201ENST00000423409 219 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 RPL23AP35-201ENST00000451906 501 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC104308.1-201ENST00000454621 333 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 ANKRD26P4-201ENST00000455755 950 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AL359385.1-201ENST00000456509 365 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AL049714.1-201ENST00000466686 347 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 RPL31P60-201ENST00000478450 367 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AP001025.2-201ENST00000490908 477 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 MTCYBP43-201ENST00000513621 740 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 RN7SKP265-201ENST00000516448 223 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AP003497.1-201ENST00000528472 562 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 UBTFL10-201ENST00000528532 562 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC093732.2-201ENST00000607950 274 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 MIR6076-201ENST00000617521 113 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC006111.3-201ENST00000622137 383 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC023510.2-201ENST00000622162 746 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 AC008568.2-201ENST00000623862 2313 ntBASIC2.98□□□□□ -1.93
LHX3Q9UBR4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX3Q9UBR4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC087359.1-201ENST00000508335 1740 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 RNU5A-1-201ENST00000362698 116 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 RNU4-28P-201ENST00000364739 141 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 EI24P2-201ENST00000397776 1076 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 MIR1290-201ENST00000408735 78 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 RNU6-1077P-201ENST00000410506 102 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 RPS24P7-201ENST00000416921 246 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 RPL22P18-201ENST00000417197 377 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 MTCO2P17-201ENST00000424336 677 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC112653.1-201ENST00000443851 386 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 MTCO1P27-201ENST00000448269 226 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX3Q9UBR4 DSTNP2-201ENST00000504533 515 ntBASIC2.97□□□□□ -1.93
LHX3Q9UBR4 AC034159.1-201ENST00000513885 583 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms