Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 JKAMPP1-201ENST00000413804 919 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AL353193.1-201ENST00000421444 268 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 OR4C10P-201ENST00000434991 931 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 RPL23AP89-201ENST00000439324 255 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 RPL36AP13-201ENST00000457490 317 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AL049830.2-201ENST00000480072 201 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 RNU6-1281P-201ENST00000516223 105 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 RN7SKP277-201ENST00000516895 283 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 IGLV3-26-201ENST00000520756 302 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC107934.1-201ENST00000522215 217 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AF235103.2-201ENST00000525753 346 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 OR8R1P-201ENST00000543943 764 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 NRBF2P5-201ENST00000603087 788 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AL162413.1-201ENST00000603198 110 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AL034351.1-201ENST00000605288 668 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 RNU4-89P-201ENST00000607443 133 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 MIR6867-201ENST00000610636 67 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 AC012150.2-201ENST00000621300 544 ntBASIC4.17□□□□□ -1.74
DKK3Q9UBP4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
DKK3Q9UBP4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 MTND4P12-201ENST00000498999 1377 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 RNA5SP189-201ENST00000364920 115 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 SNORD82-201ENST00000365530 70 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 MTHFD2P2-201ENST00000407725 247 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 Z98941.1-201ENST00000407764 100 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 RNU6-908P-201ENST00000410160 94 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 RHEBP3-201ENST00000411920 351 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 RPL21P111-201ENST00000418453 477 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AL035410.1-201ENST00000427409 427 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 OR4F13P-201ENST00000428478 931 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AL356276.2-201ENST00000435919 558 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 USP9YP8-201ENST00000441913 500 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 RPL23AP33-201ENST00000442301 452 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 RPL29P29-201ENST00000448725 423 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 RPL7P52-201ENST00000449200 742 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC079804.1-201ENST00000461922 436 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 SNRPGP3-201ENST00000469405 227 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 IFITM8P-201ENST00000522529 394 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 SUB1P2-201ENST00000556401 297 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AL359212.1-201ENST00000556608 614 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 UBE2V2P2-201ENST00000587677 504 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC007621.1-201ENST00000604544 437 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC009994.1-201ENST00000606889 253 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC093788.1-201ENST00000609356 927 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 MIR8058-201ENST00000615737 89 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC022140.2-201ENST00000623500 188 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC009033.1-201ENST00000624279 431 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC009161.2-201ENST00000624626 138 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 FER-210ENST00000628534 558 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 AC009902.3-201ENST00000606235 2172 ntBASIC4.16□□□□□ -1.74
DKK3Q9UBP4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DKK3Q9UBP4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.15□□□□□ -1.74
DKK3Q9UBP4 AL354685.2-201ENST00000448218 1447 ntBASIC4.15□□□□□ -1.74
DKK3Q9UBP4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
DKK3Q9UBP4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
DKK3Q9UBP4 SNORA60-201ENST00000362396 134 ntBASIC4.15□□□□□ -1.75
DKK3Q9UBP4 RNU6-1120P-201ENST00000362988 108 ntBASIC4.15□□□□□ -1.75
DKK3Q9UBP4 RNU6-97P-201ENST00000363387 104 ntBASIC4.15□□□□□ -1.75
DKK3Q9UBP4 RNA5SP130-201ENST00000364431 114 ntBASIC4.15□□□□□ -1.75
DKK3Q9UBP4 RNU6-108P-201ENST00000365558 107 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms