Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC116096.1-201ENST00000566804 2314 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AP004289.2-201ENST00000444413 1457 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 FARSBP1-201ENST00000435808 1778 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 RNU5E-1-201ENST00000362477 120 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 RNU6-1119P-201ENST00000384349 108 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 MIR199A2-201ENST00000385289 110 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC110754.1-201ENST00000399740 601 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 SNORA3.3-201ENST00000408712 125 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 BX295541.1-201ENST00000417774 250 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 C1DP2-201ENST00000418167 426 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 YPEL5P1-201ENST00000419731 367 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC007283.2-201ENST00000424739 197 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL589823.1-201ENST00000429577 183 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 ATP5HP2-201ENST00000433885 485 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL031667.1-201ENST00000440222 725 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC093156.1-201ENST00000440382 670 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC005094.1-201ENST00000440420 368 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 RN7SL542P-201ENST00000467147 294 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC034236.1-201ENST00000469891 373 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 RPL31P60-201ENST00000478450 367 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC114967.1-201ENST00000504890 259 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 SNORA70.16-201ENST00000516390 95 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL391156.1-201ENST00000554965 554 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC006116.10-201ENST00000591836 581 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL161734.1-201ENST00000609720 557 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC010133.1-201ENST00000615809 842 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL732618.1-201ENST00000623251 301 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 IPO8P1-201ENST00000455509 3109 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.62□□□□□ -1.83
HCN3Q9P1Z3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 OR4G2P-202ENST00000641004 1759 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RNU6-623P-201ENST00000363143 105 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RNU4-75P-201ENST00000364621 146 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 SNORA36C-201ENST00000384289 132 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RPL23AP32-201ENST00000395315 459 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 SNORA57.3-201ENST00000411095 141 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 ELOCP4-201ENST00000420090 333 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC104850.1-201ENST00000435940 476 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 TXNP1-201ENST00000441872 371 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 SNORA84-201ENST00000459229 133 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AL049714.1-201ENST00000466686 347 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RPS23P3-201ENST00000470993 430 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC010631.1-201ENST00000474150 156 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RN7SKP298-201ENST00000515950 94 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RNA5SP208-201ENST00000516156 78 ntBASIC3.61□□□□□ -1.83
HCN3Q9P1Z3 RNA5SP337-201ENST00000517007 109 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms