Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 AP002748.2-201ENST00000528671 348 ntBASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
PHRF1Q9P1Y6 SNORD114-26-201ENST00000363543 72 ntBASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 RNU6-532P-201ENST00000384318 107 ntBASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 RNA5SP498-201ENST00000411342 120 ntBASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 UBE2V1P5-201ENST00000440070 405 ntBASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 RNU6-319P-201ENST00000516025 108 ntBASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 AC084851.1-201ENST00000529105 249 ntBASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 AC024614.2-201ENST00000577584 372 ntBASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.09□□□□□ -2.07
PHRF1Q9P1Y6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 Y_RNA.354-201ENST00000365448 111 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 MIR144-201ENST00000384886 86 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 RPL31P52-201ENST00000407532 367 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 MTCYBP29-201ENST00000436327 1006 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 OR6C72P-201ENST00000451403 892 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 SNORD108-201ENST00000459332 71 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 NOP56P3-201ENST00000549457 385 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 AC012213.4-201ENST00000606457 354 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 AL157834.3-201ENST00000615543 103 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 BX649567.1-201ENST00000642071 1134 ntBASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PHRF1Q9P1Y6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 RNY1-201ENST00000364228 113 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 MIR613-201ENST00000385248 95 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 AC073264.1-201ENST00000411508 416 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 RPL30P3-201ENST00000424262 333 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 AC093716.1-201ENST00000435923 377 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 HMGN1P8-201ENST00000463578 288 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 HMGN1P7-201ENST00000491722 313 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 AC121758.2-201ENST00000553271 193 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 AC008568.2-201ENST00000623862 2313 ntBASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PHRF1Q9P1Y6 OR4G1P-203ENST00000641984 1631 ntBASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 AC009474.2-201ENST00000451383 136 ntBASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 AC090096.1-201ENST00000489168 390 ntBASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 AC008526.1-201ENST00000509149 338 ntBASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.07□□□□□ -2.08
PHRF1Q9P1Y6 RNU6-317P-201ENST00000384031 107 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 RPL23AP29-201ENST00000397284 453 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 MTCYBP45-201ENST00000435243 565 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 RPS15AP17-201ENST00000470598 390 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 MTCO3P44-201ENST00000510977 541 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC108120.2-201ENST00000512973 294 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 RNU1-92P-201ENST00000517017 135 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AC090425.2-201ENST00000608818 501 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 MIR517C-201ENST00000385103 95 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 RPS15AP1-201ENST00000457423 391 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 RPL21P103-201ENST00000479921 488 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 MTATP6P22-201ENST00000507369 598 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 SNORA31.24-201ENST00000517232 57 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 YWHAQP7-201ENST00000603536 658 ntBASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PHRF1Q9P1Y6 PABPC1P9-201ENST00000426076 1612 ntBASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 RNA5SP492-201ENST00000411330 114 ntBASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 HMGN2P20-201ENST00000437531 273 ntBASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 RPL21P131-201ENST00000497298 483 ntBASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 RNU4-60P-201ENST00000517239 135 ntBASIC2.05□□□□□ -2.08
PHRF1Q9P1Y6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms