Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC005539.1-201ENST00000443768 1479 ntBASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.71□□□□□ -1.98
KLHL28Q9NXS3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 RNU1-35P-201ENST00000362782 153 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 SNORA54-201ENST00000384281 123 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 MIR512-1-201ENST00000384913 84 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 MRPS36P1-201ENST00000421291 307 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AL139281.1-201ENST00000422120 335 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 TAAR7P-201ENST00000436141 242 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC129850.1-201ENST00000436203 508 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 RNF2P1-201ENST00000442955 1010 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 GAPDHP27-201ENST00000447427 1020 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 MTND4LP3-201ENST00000468320 276 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 RPL23AP11-201ENST00000475260 469 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 HSPE1P6-201ENST00000479457 291 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC108734.3-201ENST00000481241 1165 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC069528.1-202ENST00000482888 637 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 RPS15AP34-201ENST00000487776 387 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 RPS27P26-201ENST00000494583 239 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 HMGB1P28-201ENST00000507778 552 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC093677.1-201ENST00000514414 678 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 SNORA31.22-201ENST00000517204 135 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 RN7SKP40-201ENST00000517211 242 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 OR5G4P-201ENST00000525251 760 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 HMGB1P6-201ENST00000569046 646 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC090615.1-201ENST00000577519 154 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 VN1R78P-201ENST00000597393 564 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC012119.1-201ENST00000603184 222 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AL390208.1-201ENST00000605885 644 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC090115.4-201ENST00000609970 188 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC009237.15-201ENST00000610252 501 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AC024257.5-201ENST00000612739 531 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 MIR6130-201ENST00000619419 109 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 AP003476.1-201ENST00000623984 516 ntBASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
KLHL28Q9NXS3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC109315.1-201ENST00000584143 1347 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 RNU5A-1-201ENST00000362698 116 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 SNORA5B-201ENST00000363786 132 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 RNU6-224P-201ENST00000384055 107 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 RNU6-851P-201ENST00000384565 107 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AL356867.1-201ENST00000429623 299 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC009237.8-201ENST00000445492 379 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 RNU6-420P-201ENST00000458780 107 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC010374.2-201ENST00000512933 535 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AMZ2P1-203ENST00000565833 850 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AP001429.1-201ENST00000602568 530 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 RNU6-1192P-201ENST00000612197 107 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC004852.3-201ENST00000614131 326 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 RNU6-489P-201ENST00000618289 107 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 UCA1.1-201ENST00000620952 75 ntBASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.69□□□□□ -1.98
KLHL28Q9NXS3 AC008669.1-201ENST00000565823 2178 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 AC005832.2-201ENST00000538921 1430 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 RNU6-28P-201ENST00000362378 107 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 RNU6-270P-201ENST00000364131 105 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 Y_RNA.500-201ENST00000384466 111 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.68□□□□□ -1.98
KLHL28Q9NXS3 RNU6-1257P-201ENST00000384625 110 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms