Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC103987.3-201ENST00000582071 292 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC053481.4-201ENST00000583164 216 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC022916.3-201ENST00000592961 742 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC103591.3-201ENST00000608684 209 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC084782.3-201ENST00000612282 578 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC092140.2-201ENST00000618027 521 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC018755.4-201ENST00000619715 454 ntBASIC3.13□□□□□ -1.91
NDE1Q9NXR1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.13□□□□□ -1.91
NDE1Q9NXR1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNU6-853P-201ENST00000364306 107 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 Y_RNA.234-201ENST00000364409 97 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNA5SP51-201ENST00000364750 119 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNU6-769P-201ENST00000384407 104 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNU1-13P-201ENST00000384499 162 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNY3P10-201ENST00000384764 102 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MIR1250-201ENST00000408098 113 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RN7SKP266-201ENST00000410232 287 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MTCO1P17-201ENST00000411522 491 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC092447.6-201ENST00000414578 210 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MTCO2P34-201ENST00000421994 607 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MTND1P28-201ENST00000435623 950 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AL353706.1-201ENST00000436728 494 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC091862.1-201ENST00000438016 1100 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 Z95327.1-201ENST00000446082 482 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC093392.2-201ENST00000450682 337 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AL445669.2-201ENST00000454425 421 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 TPTE2P5-203ENST00000458118 728 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RNU6-956P-201ENST00000458868 103 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RPL21P8-201ENST00000465083 535 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 RAP1BP2-201ENST00000478270 544 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC091435.1-201ENST00000505442 584 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MTND4P2-201ENST00000507767 1203 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MTND4LP31-201ENST00000514859 294 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC068587.4-201ENST00000533893 186 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MIR4286-201ENST00000580651 93 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MIR4307-201ENST00000582802 84 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC146944.4-201ENST00000602697 718 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC064872.1-201ENST00000604823 1072 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC025048.6-202ENST00000627667 438 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC093591.3-201ENST00000634516 308 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC119674.1-207ENST00000641355 633 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 MTCO1P24-201ENST00000515438 1558 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 AC006378.2-201ENST00000623178 2476 ntBASIC3.12□□□□□ -1.91
NDE1Q9NXR1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NDE1Q9NXR1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 RNA5SP119-201ENST00000362715 117 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 Y_RNA.359-201ENST00000365498 102 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 MTCYBP24-201ENST00000420387 1106 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC006366.1-201ENST00000422002 759 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 CYCSP4-201ENST00000429682 331 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 RPL37P21-201ENST00000435890 276 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 RPL7P36-201ENST00000444633 681 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 USP9YP29-201ENST00000445112 563 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 MTCO1P42-201ENST00000457379 726 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 VN1R105P-201ENST00000486595 910 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AP001025.2-201ENST00000490908 477 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC021678.1-201ENST00000505195 936 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC022447.3-201ENST00000506865 495 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.11□□□□□ -1.91
NDE1Q9NXR1 MTCO3P7-201ENST00000510008 774 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 RN7SKP282-201ENST00000516824 299 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC007991.1-201ENST00000522680 631 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AP003385.6-201ENST00000531603 374 ntBASIC3.11□□□□□ -1.91
NDE1Q9NXR1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms