Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC090888.1-201ENST00000561335 1141 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC068620.3-201ENST00000602749 560 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC011451.2-201ENST00000604303 598 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL390208.1-201ENST00000605885 644 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC004067.1-201ENST00000608733 700 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL161734.1-201ENST00000609720 557 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC004852.3-201ENST00000614131 326 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 MIR6130-201ENST00000619419 109 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AC079228.1-201ENST00000624774 1049 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.42□□□□□ -2.02
CLN6Q9NWW5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CLN6Q9NWW5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 MIR422A-201ENST00000362286 90 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 MIR627-201ENST00000384979 97 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 MIR514A1-201ENST00000385133 98 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 RNA5SP354-201ENST00000391247 136 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 SPA17P1-201ENST00000416656 452 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 RPL7P44-201ENST00000424827 742 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 MTND4P6-201ENST00000438297 472 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 RPS12P2-201ENST00000439728 269 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 KC877373.1-201ENST00000479066 408 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 RPS27P27-201ENST00000498779 255 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 MTCYBP17-201ENST00000503579 789 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AC112198.4-201ENST00000515450 351 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 RNU6-1256P-201ENST00000516539 103 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 SNORA31.22-201ENST00000517204 135 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AC100870.1-201ENST00000522035 505 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AC069304.2-201ENST00000605154 435 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AC093673.2-201ENST00000609674 331 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 RNU6-1192P-201ENST00000612197 107 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 RNU6-489P-201ENST00000618289 107 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 AC126544.2-201ENST00000625174 749 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 OR4G2P-202ENST00000641004 1759 ntBASIC2.41□□□□□ -2.02
CLN6Q9NWW5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CLN6Q9NWW5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CLN6Q9NWW5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.4□□□□□ -2.02
CLN6Q9NWW5 RNA5SP374-201ENST00000362939 125 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 RNU1-105P-201ENST00000363470 161 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 RNU6-270P-201ENST00000364131 105 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 snoZ40.1-201ENST00000364540 72 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 RNU6-1035P-201ENST00000384477 107 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AL138885.1-201ENST00000405921 675 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AL356967.1-201ENST00000406305 431 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 RNU2-25P-201ENST00000411041 191 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 NIPA2P1-201ENST00000426223 976 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.4□□□□□ -2.03
CLN6Q9NWW5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLN6Q9NWW5 snoU13.8-201ENST00000458890 104 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 RPS27P26-201ENST00000494583 239 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AIG1P1-201ENST00000503376 148 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.4□□□□□ -2.03
CLN6Q9NWW5 RN7SKP31-201ENST00000516354 278 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 RN7SKP40-201ENST00000517211 242 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 LRRC6P1-201ENST00000532188 885 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AC124947.2-202ENST00000552735 133 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.4□□□□□ -2.03
CLN6Q9NWW5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AC138761.3-201ENST00000579993 334 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 VN1R78P-201ENST00000597393 564 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AL035413.2-201ENST00000604801 525 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AC084757.4-201ENST00000616350 526 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 AC103798.2-201ENST00000624292 632 ntBASIC2.4□□□□□ -2.03
CLN6Q9NWW5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.4□□□□□ -2.03
CLN6Q9NWW5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
CLN6Q9NWW5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 MIR767-201ENST00000390228 109 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 HMGB1P17-201ENST00000403495 628 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 Z85995.1-201ENST00000415547 335 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 OR4K6P-201ENST00000416478 897 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AC018630.2-202ENST00000422992 927 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 RNF2P1-201ENST00000442955 1010 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AL109741.2-201ENST00000455561 343 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AL135752.1-201ENST00000479477 471 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms