Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 CBX3P5-201ENST00000552017 521 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AL109766.1-201ENST00000555080 552 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC034105.3-201ENST00000565294 442 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC025678.1-201ENST00000567861 338 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 MIR432-201ENST00000606207 94 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC093788.1-201ENST00000609356 927 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AC068944.2-201ENST00000610373 403 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 AL110115.1-201ENST00000614396 364 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 MFSD8-216ENST00000641147 4009 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.6□□□□□ -1.83
LIN7CQ9NUP9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 MTND5P17-201ENST00000418405 1603 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNA5SP388-201ENST00000362584 119 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNA5SP502-201ENST00000362694 119 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNU6-288P-201ENST00000363690 104 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNU6-1322P-201ENST00000364309 107 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNU6-61P-201ENST00000365528 109 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNA5SP332-201ENST00000391063 115 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AL139397.2-201ENST00000404529 772 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 CIR1P3-201ENST00000405137 479 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 DDX3P2-201ENST00000446138 111 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RPL23AP43-201ENST00000446445 471 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 FABP5P13-201ENST00000452144 328 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNU6-420P-201ENST00000458780 107 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RNU7-182P-201ENST00000459009 62 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC092989.1-201ENST00000481235 277 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AP001086.1-201ENST00000494882 321 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 TTC39CP1-201ENST00000512513 755 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RN7SKP13-201ENST00000515933 244 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AL512310.1-201ENST00000548639 172 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC008752.3-201ENST00000588113 712 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC010591.1-201ENST00000603941 649 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC104763.2-201ENST00000604179 382 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC013553.2-201ENST00000604244 589 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC007621.1-201ENST00000604544 437 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC023043.4-201ENST00000612081 449 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AL365204.3-201ENST00000612448 685 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RMST_9.1-201ENST00000619945 193 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AP000346.3-201ENST00000622821 210 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 AC025034.2-201ENST00000623264 286 ntBASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LIN7CQ9NUP9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LIN7CQ9NUP9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.59□□□□□ -1.84
LIN7CQ9NUP9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LIN7CQ9NUP9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LIN7CQ9NUP9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.84
LIN7CQ9NUP9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.84
LIN7CQ9NUP9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LIN7CQ9NUP9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 Y_RNA.402-201ENST00000383972 102 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 MIR513A2-201ENST00000385249 127 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 SOD2P1-201ENST00000396543 562 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 RPL26P29-201ENST00000415623 438 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 AL161631.1-201ENST00000417933 486 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 BTF3L4P3-201ENST00000418879 476 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 AC004552.1-201ENST00000419089 348 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 BX842559.1-201ENST00000419615 532 ntBASIC3.58□□□□□ -1.84
LIN7CQ9NUP9 CYP4F29P-201ENST00000420685 446 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms