Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AL121601.2-201ENST00000438019 707 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AP000949.1-201ENST00000438328 629 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 HMGN2P10-201ENST00000448085 265 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 HMGN1P5-201ENST00000448591 263 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC108938.1-201ENST00000451204 136 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 MIR4529-201ENST00000578110 78 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 VN1R81P-201ENST00000602085 372 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC103881.1-201ENST00000603476 538 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AL109618.2-201ENST00000605527 211 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 AC091812.1-201ENST00000432235 1948 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 NUP58P1-201ENST00000502546 1738 ntBASIC1.18□□□□□ -2.22
SMCO4Q9NRQ5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 ZNF355P-201ENST00000427301 3216 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 SNORA67.3-201ENST00000384366 140 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 MIR1304-201ENST00000408243 91 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 RNU2-2P-201ENST00000410396 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 UBE2FP1-201ENST00000416536 447 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 TMEM167AP1-201ENST00000423409 219 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AL365496.1-201ENST00000426885 215 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AC124916.1-201ENST00000444020 547 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 RPL23AP6-201ENST00000446637 472 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AC005002.1-201ENST00000447458 540 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AL358232.1-201ENST00000448030 501 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 MTND2P8-201ENST00000450555 1025 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 LARP7P4-201ENST00000481075 878 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 RPS29P11-201ENST00000496507 171 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AC109471.1-201ENST00000511631 612 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 FAM60BP-201ENST00000578364 658 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 MIR3200-201ENST00000580767 85 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 MIR3944-201ENST00000581277 108 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AC007448.1-201ENST00000582714 234 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 AC096577.2-201ENST00000611455 153 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.15-201ENST00000611544 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.16-201ENST00000613119 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.12-201ENST00000613778 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.20-201ENST00000613956 192 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.9-201ENST00000615427 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.11-201ENST00000616345 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.2-201ENST00000616535 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.3-201ENST00000617785 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.19-201ENST00000618602 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 RNU2-1-201ENST00000618664 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.6-201ENST00000619225 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.5-201ENST00000619465 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 U2.10-201ENST00000620268 191 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 ZNF876P-202ENST00000398732 1485 ntBASIC1.17□□□□□ -2.22
SMCO4Q9NRQ5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 UBE2L2-201ENST00000254302 429 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 SNORA48.7-201ENST00000391302 135 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AL135786.1-201ENST00000415892 214 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AC008173.1-201ENST00000418901 264 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AL645638.1-201ENST00000440519 361 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 Z77249.1-201ENST00000444622 1175 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 WASF1P1-201ENST00000447560 1131 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 RNU1-103P-201ENST00000516502 125 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 PCNAP1-202ENST00000595299 752 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AC103710.4-201ENST00000609301 899 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AL442067.2-201ENST00000614033 363 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 MIR7843-201ENST00000622274 79 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 MIR6810-201ENST00000622701 70 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AC006386.2-201ENST00000624491 75 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AC012005.1-201ENST00000624575 75 ntBASIC1.16□□□□□ -2.22
SMCO4Q9NRQ5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
SMCO4Q9NRQ5 HSPA8P4-201ENST00000511877 1920 ntBASIC1.15□□□□□ -2.22
SMCO4Q9NRQ5 RNA5SP276-201ENST00000362580 94 ntBASIC1.15□□□□□ -2.23
SMCO4Q9NRQ5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms