Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AP003066.2-201ENST00000529375 555 ntBASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AC023825.1-201ENST00000566704 1030 ntBASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AC068135.2-201ENST00000569293 1028 ntBASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 MIR5708-201ENST00000579723 85 ntBASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 MTATP6P2-201ENST00000603319 678 ntBASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AL160237.3-201ENST00000604114 1013 ntBASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AL035413.2-201ENST00000604801 525 ntBASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.54□□□□□ -2
CCNB1IP1Q9NPC3 AC096644.4-201ENST00000563417 2912 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC005832.2-201ENST00000538921 1430 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AL049641.1-201ENST00000441055 1948 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 RNU1-105P-201ENST00000363470 161 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 SNORA36C-201ENST00000384289 132 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 MIR491-201ENST00000384877 84 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 MIR514A1-201ENST00000385133 98 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 MIR325-201ENST00000385260 98 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 RNU6-193P-201ENST00000410977 107 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 PPP1R11P2-201ENST00000423543 382 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AL590383.1-201ENST00000428602 75 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AL512844.2-201ENST00000433990 593 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 RNU7-23P-201ENST00000459465 62 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC087588.1-201ENST00000462203 316 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 MTCYBP16-201ENST00000509187 1129 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC022861.1-201ENST00000522981 663 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 HIGD1AP17-201ENST00000554576 276 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AP001429.1-201ENST00000602568 530 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC069304.2-201ENST00000605154 435 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC004852.3-201ENST00000614131 326 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.53□□□□□ -2
CCNB1IP1Q9NPC3 AC005539.1-201ENST00000443768 1479 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC135776.4-201ENST00000624300 1904 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 ANKRD36P1-201ENST00000344424 659 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 SNORA70.4-201ENST00000365509 134 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 MTCO1P56-201ENST00000401674 224 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 HMGB1P17-201ENST00000403495 628 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC018630.2-202ENST00000422992 927 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 SDCBPP1-201ENST00000440192 890 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 MTND2P20-201ENST00000440805 661 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 BMI1P1-201ENST00000445879 941 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 NIPA2P5-201ENST00000452282 464 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC114981.1-201ENST00000503897 678 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC093677.1-201ENST00000514414 678 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 RNU6-528P-201ENST00000516926 100 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC087808.1-201ENST00000520501 361 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 DEFB130C-202ENST00000530001 230 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC124947.2-202ENST00000552735 133 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC103810.1-201ENST00000579873 453 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 BNIP3P22-201ENST00000593399 556 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AL390838.2-201ENST00000602394 274 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC008277.2-201ENST00000605196 797 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC120053.1-201ENST00000607706 736 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC004067.1-201ENST00000608733 700 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AC073308.1-201ENST00000623696 305 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 CR848007.1-201ENST00000442354 1699 ntBASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
CCNB1IP1Q9NPC3 AP005901.5-201ENST00000545779 1796 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 GNG5P1-201ENST00000255500 204 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 RNU1-100P-201ENST00000365255 165 ntBASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCNB1IP1Q9NPC3 SNORA48.5-201ENST00000391143 135 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms