Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC022432.1-201ENST00000595739 310 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 BNIP3P11-201ENST00000603878 563 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AP001836.1-201ENST00000604675 523 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC009233.1-201ENST00000616477 371 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC004825.2-201ENST00000616634 455 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC108479.2-201ENST00000617314 601 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 FRG1KP-201ENST00000623592 341 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 U6.105-201ENST00000637379 88 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC024614.3-201ENST00000637860 256 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 AC119674.1-207ENST00000641355 633 ntBASIC3.9□□□□□ -1.79
EBF3Q9H4W6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.9□□□□□ -1.79
EBF3Q9H4W6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 RNU6-533P-201ENST00000384144 107 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 RNU6-809P-201ENST00000384461 107 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MIR183-201ENST00000384958 110 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 RNU6-332P-201ENST00000391193 108 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 SDCBPP3-201ENST00000419629 891 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC023347.2-201ENST00000433994 462 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 SDCBPP1-201ENST00000440192 890 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MTCO1P27-201ENST00000448269 226 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 ARPC3P5-201ENST00000448802 534 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 RPS17P13-201ENST00000448974 407 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 RN7SL293P-201ENST00000481765 281 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 POU5F1P7-201ENST00000508759 541 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC021146.1-201ENST00000511202 716 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC135001.1-201ENST00000544546 283 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AL133457.1-201ENST00000564251 987 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MIR4307-201ENST00000582802 84 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AL009028.1-201ENST00000604895 802 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 RNU1-30P-201ENST00000606575 163 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC097468.3-201ENST00000607956 456 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC093788.1-201ENST00000609356 927 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC096577.2-201ENST00000611455 153 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC000123.2-201ENST00000623124 461 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MIR3662-201ENST00000637030 95 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
EBF3Q9H4W6 AC007529.1-201ENST00000418574 2178 ntBASIC3.89□□□□□ -1.79
EBF3Q9H4W6 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 U8.3-201ENST00000363321 132 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 Y_RNA.573-201ENST00000384763 105 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL121972.1-201ENST00000402023 252 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 RN7SKP285-201ENST00000410137 318 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 RN7SKP266-201ENST00000410232 287 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 RPS20P15-201ENST00000412792 311 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 RPS3AP46-201ENST00000448352 682 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 MTCO3P20-201ENST00000454926 688 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 RPS20P24-201ENST00000457473 361 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 PLGLA-201ENST00000465668 449 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
EBF3Q9H4W6 AC023598.1-201ENST00000472521 361 ntBASIC3.88□□□□□ -1.79
EBF3Q9H4W6 RPL30P11-201ENST00000495304 339 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms