Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 UBE2L4-201ENST00000587688 464 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 SRGNP1-201ENST00000603392 451 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 MTCYBP22-201ENST00000603788 447 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 PRELID3BP8-201ENST00000604148 295 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC008147.4-201ENST00000617570 1204 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AL158801.5-201ENST00000623123 465 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC009902.3-201ENST00000606235 2172 ntBASIC3.14□□□□□ -1.91
UBQLN3Q9H347 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.14□□□□□ -1.91
UBQLN3Q9H347 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 SKINT1L-201ENST00000401057 817 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 PPP1R11P2-201ENST00000423543 382 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 RPL23AP82-202ENST00000427528 469 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 CETN4P-201ENST00000432407 469 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 CENPBD1P1-201ENST00000464061 469 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 RPL23AP67-201ENST00000465341 474 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 RPL31P60-201ENST00000478450 367 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC074250.1-201ENST00000511117 192 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 SNORA31.22-201ENST00000517204 135 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 IGKV2-26-201ENST00000518305 343 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC107934.2-201ENST00000518653 310 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 MIR3921-201ENST00000577308 85 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 MIR4307-201ENST00000582802 84 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC105224.1-201ENST00000587055 421 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC008507.1-201ENST00000587506 734 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC007179.3-201ENST00000604976 235 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC122133.1-201ENST00000613964 233 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC079248.2-201ENST00000623779 326 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC112204.3-201ENST00000623822 332 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC019226.1-201ENST00000625666 515 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 SNORA50A-202ENST00000629536 136 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 CCT4P2-201ENST00000233836 1548 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC032011.1-201ENST00000611703 1549 ntBASIC3.13□□□□□ -1.91
UBQLN3Q9H347 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
UBQLN3Q9H347 AC006378.2-201ENST00000623178 2476 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 RNU6-500P-201ENST00000362349 107 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 RNU6-432P-201ENST00000384196 109 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 RNVU1-14-201ENST00000384770 164 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 CCNG1P1-201ENST00000406783 885 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 MIR1290-201ENST00000408735 78 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 TPMTP3-201ENST00000411928 735 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 RPS7P13-201ENST00000413955 498 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 HSPE1P1-201ENST00000421494 318 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 ZNF114P1-201ENST00000453500 292 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL359385.1-201ENST00000456509 365 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AP1S2P1-201ENST00000457344 379 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 MTCO2P6-201ENST00000463134 685 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL049714.1-201ENST00000466686 347 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 RN7SL442P-201ENST00000473804 320 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 RPL21P13-201ENST00000488305 481 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL049874.1-201ENST00000489560 388 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL358832.1-201ENST00000497800 389 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 HSPD1P15-201ENST00000505573 1122 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 NCAPGP2-201ENST00000557911 754 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL845331.3-202ENST00000562856 261 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms