Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AL353997.1-201ENST00000432936 108 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AL031274.1-201ENST00000450334 232 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AL353691.1-201ENST00000451332 387 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 OR2AQ1P-201ENST00000451972 200 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AL138752.1-201ENST00000452964 351 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AC007967.1-201ENST00000455422 1159 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 RNU7-187P-201ENST00000458985 68 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AP001086.1-201ENST00000494882 321 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 BX510359.5-201ENST00000515651 304 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 HMGB1P40-201ENST00000525121 540 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AC018552.1-201ENST00000562099 811 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AL359547.2-201ENST00000615810 418 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AP001282.2-201ENST00000616149 309 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AC118658.2-201ENST00000618697 459 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AL159153.1-201ENST00000619688 317 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC005332.5-201ENST00000591222 2919 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 MIR133B-201ENST00000362210 119 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 Y_RNA.105-201ENST00000363182 111 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 MIR517A-201ENST00000385001 87 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 BX276092.3-201ENST00000424182 230 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 MTCO3P29-201ENST00000432119 779 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AL645568.3-201ENST00000433683 316 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 CYCSP6-201ENST00000434498 302 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC087385.1-201ENST00000475062 312 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC084198.1-201ENST00000477747 402 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 RN7SL447P-201ENST00000494711 245 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC092436.3-201ENST00000511788 257 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AP001922.4-201ENST00000526967 290 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC010620.2-201ENST00000600135 313 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC012669.1-201ENST00000603209 283 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 PSMA6P4-201ENST00000603247 718 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC064801.1-201ENST00000612025 407 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AL731566.2-201ENST00000618971 317 ntBASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.65□□□□□ -1.5
NUCKS1Q9H1E3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 OR51H2P-202ENST00000641424 3046 ntBASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 GABPAP-201ENST00000419271 1356 ntBASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUCKS1Q9H1E3 AC027287.1-201ENST00000553115 1453 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 XIAPP3-201ENST00000312918 795 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 SNORD82-201ENST00000365530 70 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 SNORD58.1-201ENST00000391313 66 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AC005522.1-201ENST00000395416 346 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 RNU2-33P-201ENST00000410344 192 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 RPS4XP1-201ENST00000482189 787 ntBASIC5.64□□□□□ -1.51
NUCKS1Q9H1E3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms