Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 SNORA6-201ENST00000384033 151 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 PRELID3BP11-201ENST00000414230 479 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 Z99714.1-201ENST00000450463 807 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 OR7L1P-201ENST00000456181 380 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 Y_RNA.670-201ENST00000516255 105 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AP002748.2-201ENST00000528671 348 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 SEPT7P9-203ENST00000604116 343 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 AC105429.2-201ENST00000610567 517 ntBASIC2.42□□□□□ -2.02
SCAPERQ9BY12 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.42□□□□□ -2.02
SCAPERQ9BY12 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SCAPERQ9BY12 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SCAPERQ9BY12 AC002546.1-201ENST00000588041 2504 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 RNA5SP489-201ENST00000410986 109 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 RNU2-25P-201ENST00000411041 191 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 RN7SKP101-201ENST00000411376 320 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 AL030996.1-201ENST00000411430 235 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 BX510359.4-201ENST00000423750 193 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 RNA5SP364-201ENST00000516938 78 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 RNU6-711P-201ENST00000517255 106 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 MIR4452-201ENST00000583004 71 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.41□□□□□ -2.02
SCAPERQ9BY12 BX649567.1-201ENST00000642071 1134 ntBASIC2.41□□□□□ -2.02
SCAPERQ9BY12 RPL31P2-201ENST00000413849 377 ntBASIC2.4□□□□□ -2.03
SCAPERQ9BY12 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.4□□□□□ -2.03
SCAPERQ9BY12 MTCO2P9-201ENST00000503214 694 ntBASIC2.4□□□□□ -2.03
SCAPERQ9BY12 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.4□□□□□ -2.03
SCAPERQ9BY12 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.4□□□□□ -2.03
SCAPERQ9BY12 MIR3618-201ENST00000580330 88 ntBASIC2.4□□□□□ -2.03
SCAPERQ9BY12 AC012493.3-201ENST00000604494 112 ntBASIC2.4□□□□□ -2.03
SCAPERQ9BY12 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.4□□□□□ -2.03
SCAPERQ9BY12 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCAPERQ9BY12 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SCAPERQ9BY12 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.39□□□□□ -2.03
SCAPERQ9BY12 U3.40-201ENST00000408706 208 ntBASIC2.39□□□□□ -2.03
SCAPERQ9BY12 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.39□□□□□ -2.03
SCAPERQ9BY12 AC244505.5-201ENST00000443639 207 ntBASIC2.39□□□□□ -2.03
SCAPERQ9BY12 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.39□□□□□ -2.03
SCAPERQ9BY12 AC079203.1-201ENST00000487972 404 ntBASIC2.39□□□□□ -2.03
SCAPERQ9BY12 HMGN1P7-201ENST00000491722 313 ntBASIC2.39□□□□□ -2.03
SCAPERQ9BY12 AC023050.1-201ENST00000498198 304 ntBASIC2.39□□□□□ -2.03
SCAPERQ9BY12 AC087808.1-201ENST00000520501 361 ntBASIC2.39□□□□□ -2.03
SCAPERQ9BY12 AL109653.1-201ENST00000603091 248 ntBASIC2.39□□□□□ -2.03
SCAPERQ9BY12 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SCAPERQ9BY12 SNORA67.6-201ENST00000391093 99 ntBASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.38□□□□□ -2.03
SCAPERQ9BY12 TPT1P14-201ENST00000448018 505 ntBASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AC009901.1-201ENST00000506703 541 ntBASIC2.38□□□□□ -2.03
SCAPERQ9BY12 RAC1P5-201ENST00000512182 576 ntBASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AC012150.2-201ENST00000621300 544 ntBASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AC079597.1-201ENST00000624306 508 ntBASIC2.38□□□□□ -2.03
SCAPERQ9BY12 MIR203B-201ENST00000636080 86 ntBASIC2.38□□□□□ -2.03
SCAPERQ9BY12 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.38□□□□□ -2.03
SCAPERQ9BY12 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 ELOCP6-201ENST00000429066 328 ntBASIC2.37□□□□□ -2.03
SCAPERQ9BY12 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 ELOCP12-201ENST00000458706 328 ntBASIC2.37□□□□□ -2.03
SCAPERQ9BY12 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 ANP32BP3-201ENST00000559213 706 ntBASIC2.37□□□□□ -2.03
SCAPERQ9BY12 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SCAPERQ9BY12 RNU6-1027P-201ENST00000383998 107 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 MTCYBP45-201ENST00000435243 565 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.36□□□□□ -2.03
SCAPERQ9BY12 RPL21P103-201ENST00000479921 488 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 RN7SL274P-201ENST00000492268 272 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.36□□□□□ -2.03
SCAPERQ9BY12 AP005136.1-201ENST00000579765 429 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.36□□□□□ -2.03
SCAPERQ9BY12 RNA5SP108-201ENST00000605921 117 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 AC098657.3-201ENST00000620434 263 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 ZNF734P-201ENST00000419494 1534 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SCAPERQ9BY12 ZNF209P-201ENST00000593450 2304 ntBASIC2.36□□□□□ -2.03
SCAPERQ9BY12 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCAPERQ9BY12 RPL21P1-201ENST00000399532 476 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.35□□□□□ -2.03
SCAPERQ9BY12 RPL26P37-201ENST00000411983 438 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.35□□□□□ -2.03
SCAPERQ9BY12 RPS3AP9-201ENST00000417027 792 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 Z75741.2-201ENST00000417272 1167 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AL358075.3-201ENST00000426289 226 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AL121871.1-201ENST00000443413 436 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AC022493.1-201ENST00000492984 337 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AC093281.2-201ENST00000510153 597 ntBASIC2.35□□□□□ -2.03
SCAPERQ9BY12 AC006499.2-201ENST00000513470 337 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms