Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AP003181.2-201ENST00000528941 181 ntBASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 RN7SL703P-201ENST00000578485 302 ntBASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 CKS1BP3-201ENST00000600888 237 ntBASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AL138880.2-201ENST00000616214 239 ntBASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AL139089.1-201ENST00000620372 975 ntBASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 AC034229.5-201ENST00000624258 185 ntBASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.92□□□□□ -1.78
HERPUD2Q9BSE4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 RNU6-283P-201ENST00000364788 107 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AMD1P2-201ENST00000412936 992 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC091390.3-201ENST00000426478 338 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 MTATP6P26-201ENST00000445926 662 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC016696.1-201ENST00000446949 318 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC020550.1-201ENST00000447385 163 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC140076.1-201ENST00000449897 361 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 snoU109.1-201ENST00000459339 135 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC010468.1-201ENST00000461022 817 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 RPS20P22-201ENST00000473700 357 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC068724.1-201ENST00000487100 792 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 RN7SKP83-201ENST00000516512 178 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC011979.2-201ENST00000527568 352 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC008011.1-201ENST00000545989 227 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC128657.1-201ENST00000549459 145 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC009977.1-201ENST00000586015 570 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC010620.1-201ENST00000601088 1102 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 HSPE1P7-201ENST00000604681 321 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC008250.2-201ENST00000615261 205 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 Z69908.1-201ENST00000622603 247 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 FP236240.3-201ENST00000623061 327 ntBASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERPUD2Q9BSE4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.9□□□□□ -1.78
HERPUD2Q9BSE4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HERPUD2Q9BSE4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.9□□□□□ -1.78
HERPUD2Q9BSE4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
HERPUD2Q9BSE4 AL049641.1-201ENST00000441055 1948 ntBASIC3.9□□□□□ -1.78
HERPUD2Q9BSE4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 FGF7P2-201ENST00000332473 296 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 RNU1-101P-201ENST00000391171 127 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 RNU2-8P-201ENST00000410727 190 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 PIGFP3-201ENST00000441918 722 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AL033528.1-201ENST00000453780 140 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AL136097.1-201ENST00000456945 913 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 RPL21P11-201ENST00000461458 483 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 MTND4LP31-201ENST00000514859 294 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AP000860.1-201ENST00000605250 559 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AC004908.3-201ENST00000610248 625 ntBASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
HERPUD2Q9BSE4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HERPUD2Q9BSE4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms