Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR6733-201ENST00000635723 61 ntBASIC2.94□□□□□ -1.94
VPS35Q96QK1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VPS35Q96QK1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS35Q96QK1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS35Q96QK1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 ZNF833P-201ENST00000424938 1494 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS35Q96QK1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 NANOGP5-201ENST00000424456 877 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 RPL35AP12-201ENST00000425362 338 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 SAR1AP4-201ENST00000429225 591 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 OR4K11P-201ENST00000431829 904 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC092573.2-201ENST00000434546 243 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 RPS25P9-201ENST00000435591 252 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC092155.2-201ENST00000454675 477 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 MEMO1P3-201ENST00000459811 302 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC011825.1-201ENST00000484967 388 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC083906.5-201ENST00000503722 328 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC111000.2-201ENST00000507775 550 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC098799.2-201ENST00000509466 868 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC006445.2-201ENST00000510061 472 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 RNU6-798P-201ENST00000516912 103 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 SNORA31.22-201ENST00000517204 135 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 OR5G4P-201ENST00000525251 760 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 CASP1P1-201ENST00000526345 212 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS35Q96QK1 AL353997.4-201ENST00000586196 166 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC005000.2-201ENST00000605468 310 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AL158211.4-201ENST00000606988 584 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC004067.1-201ENST00000608733 700 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC006213.4-201ENST00000616184 634 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AL138880.2-201ENST00000616214 239 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS35Q96QK1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS35Q96QK1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC005832.2-201ENST00000538921 1430 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 AC011477.1-204ENST00000623416 1325 ntBASIC2.93□□□□□ -1.94
VPS35Q96QK1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AL161781.1-201ENST00000354277 403 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 RNU6-359P-201ENST00000365466 108 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 SNORA48.2-201ENST00000390926 124 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 MTND4P13-201ENST00000402078 1023 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 MTCYBP38-201ENST00000417160 1123 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 BX119904.4-201ENST00000424402 301 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC109583.1-201ENST00000432156 268 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 USP9YP24-201ENST00000434374 697 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 USP9YP17-201ENST00000444617 696 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 MTND1P31-201ENST00000449206 961 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 OR6K1P-201ENST00000456766 971 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AL031183.1-201ENST00000457667 207 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 SNORD121B-201ENST00000458838 81 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 RPL30P9-201ENST00000465586 330 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC104472.2-201ENST00000469035 601 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 RPS29P2-201ENST00000479278 136 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 HSPE1P6-201ENST00000479457 291 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC108729.1-201ENST00000487812 947 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 ARL4AP2-201ENST00000507378 601 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
VPS35Q96QK1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 AL136370.1-201ENST00000608166 691 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC091046.2-201ENST00000620775 665 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 AC091953.5-201ENST00000622919 233 ntBASIC2.92□□□□□ -1.94
VPS35Q96QK1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS35Q96QK1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VPS35Q96QK1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms