Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL451054.2-201ENST00000420896 202 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 RAC1P6-201ENST00000423911 575 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 RSL24D1P6-201ENST00000426934 401 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 CEACAMP4-201ENST00000457676 421 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 RN7SL385P-201ENST00000468873 276 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC004924.1-201ENST00000480160 781 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 RPL29P14-201ENST00000495837 428 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL358832.1-201ENST00000497800 389 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC124947.2-202ENST00000552735 133 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC025884.1-201ENST00000556034 378 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 RPL21P12-201ENST00000559810 515 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC009063.1-201ENST00000563342 702 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 RN7SL600P-201ENST00000581811 299 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC012417.1-201ENST00000582307 1039 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL670379.6-201ENST00000603753 252 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL670379.11-201ENST00000604059 253 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL136363.2-201ENST00000604173 851 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC008162.1-201ENST00000604718 254 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL670379.1-201ENST00000604752 252 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL670379.5-201ENST00000605253 252 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL670379.12-201ENST00000605291 253 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL670379.8-201ENST00000605353 252 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL670379.7-201ENST00000605823 252 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 AC090132.2-201ENST00000615881 347 ntBASIC4.01□□□□□ -1.77
CCDC138Q96M89 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
CCDC138Q96M89 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC138Q96M89 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4□□□□□ -1.77
CCDC138Q96M89 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC138Q96M89 SNORA60-201ENST00000362396 134 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 SNORD6-201ENST00000365444 73 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 RNU5E-6P-201ENST00000365574 115 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 RNU6-259P-201ENST00000383999 107 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AP000567.1-201ENST00000406413 156 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AC108032.1-201ENST00000416706 207 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC133104.1-201ENST00000429100 218 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 FCF1P1-201ENST00000432690 571 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC079448.1-201ENST00000449377 373 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 SNRPGP6-201ENST00000451124 220 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 RPS3AP17-201ENST00000472594 777 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 RN7SL271P-201ENST00000487601 295 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC069499.1-201ENST00000489433 509 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 RN7SL604P-201ENST00000492589 296 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AC105252.1-201ENST00000503089 286 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4□□□□□ -1.77
CCDC138Q96M89 RNU7-143P-201ENST00000516781 65 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 RNA5SP143-201ENST00000516936 115 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 DUXAP2-201ENST00000519198 589 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4□□□□□ -1.77
CCDC138Q96M89 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC138Q96M89 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4□□□□□ -1.77
CCDC138Q96M89 AC068880.5-201ENST00000624331 290 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CCDC138Q96M89 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CCDC138Q96M89 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC138Q96M89 CR848007.1-201ENST00000442354 1699 ntBASIC4□□□□□ -1.77
CCDC138Q96M89 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC138Q96M89 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC138Q96M89 RPS4XP5-202ENST00000449995 1334 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC138Q96M89 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 BX842559.1-201ENST00000419615 532 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 RPL17P36-201ENST00000420302 549 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 AC245054.1-201ENST00000420944 258 ntBASIC3.99□□□□□ -1.77
CCDC138Q96M89 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC138Q96M89 OR2AS1P-201ENST00000427827 319 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms