Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 RNU6-217P-201ENST00000384164 104 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 RNU6-906P-201ENST00000384700 70 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 AL513331.1-201ENST00000411908 397 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 UBE2FP1-201ENST00000416536 447 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 RPL7P37-201ENST00000425095 738 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 MTCO2P23-201ENST00000425216 680 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 AL451062.2-201ENST00000427515 271 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 ATP5JP1-201ENST00000431631 322 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC084290.1-201ENST00000434995 374 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 RPL23AP20-201ENST00000447965 421 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC087588.1-201ENST00000462203 316 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 RPS20P22-201ENST00000473700 357 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 RPS15AP36-201ENST00000492022 382 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC118282.1-201ENST00000506408 765 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 CDC42P4-201ENST00000510507 563 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 ATP5F1P5-201ENST00000526403 760 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC060771.1-201ENST00000582031 164 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 RPL23AP88-201ENST00000605759 454 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 SDR42E1P2-201ENST00000614861 481 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 MTND1P37-201ENST00000636562 264 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC026241.1-201ENST00000517873 2142 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 AC004972.1-201ENST00000623934 2209 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.25□□□□□ -1.89
VMP1Q96GC9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VMP1Q96GC9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
VMP1Q96GC9 U3.11-201ENST00000364476 212 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.25□□□□□ -1.89
VMP1Q96GC9 AC068533.1-201ENST00000418542 415 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 AC106883.1-201ENST00000418805 562 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 AL451054.2-201ENST00000420896 202 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.25□□□□□ -1.89
VMP1Q96GC9 MTCYBP3-201ENST00000445588 1137 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.25□□□□□ -1.89
VMP1Q96GC9 AP000542.1-201ENST00000448473 371 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 USP9YP25-201ENST00000457708 443 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 MIR3908-201ENST00000579798 126 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 VN1R82P-201ENST00000601481 356 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 AL158042.1-201ENST00000605338 460 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 AC244100.1-202ENST00000621554 382 ntBASIC3.25□□□□□ -1.89
VMP1Q96GC9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
VMP1Q96GC9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VMP1Q96GC9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VMP1Q96GC9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AL672167.1-206ENST00000356293 943 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 SNORA4.1-201ENST00000364263 144 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 RNU6-140P-201ENST00000384566 108 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 RNU2-33P-201ENST00000410344 192 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 RAP1BP1-201ENST00000412709 553 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 ZNF863P-201ENST00000426746 417 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 TXNL1P1-201ENST00000429528 554 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 ISCA1P2-201ENST00000438679 421 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 GAPDHP27-201ENST00000447427 1020 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 PRSS3P4-201ENST00000453323 162 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC025518.1-201ENST00000479856 347 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 RN7SL283P-201ENST00000489055 303 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC093809.1-201ENST00000509155 340 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 OR5BM1P-201ENST00000512021 366 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC023538.1-201ENST00000534576 736 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 MTCO2P2-201ENST00000591258 225 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC005498.1-201ENST00000592125 465 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AC024220.1-201ENST00000603675 484 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 AL355365.1-201ENST00000616480 294 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 AL136981.2-201ENST00000617319 734 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 U6.105-201ENST00000637379 88 ntBASIC3.24□□□□□ -1.89
VMP1Q96GC9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VMP1Q96GC9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VMP1Q96GC9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VMP1Q96GC9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VMP1Q96GC9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.23□□□□□ -1.89
VMP1Q96GC9 SNORA63.1-201ENST00000362493 131 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RNU4-35P-201ENST00000362588 141 ntBASIC3.23□□□□□ -1.89
VMP1Q96GC9 RNA5SP72-201ENST00000364442 117 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms