Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC006116.10-201ENST00000591836 581 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC012557.2-201ENST00000605919 418 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 OR2AS2P-201ENST00000606902 342 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC092140.2-201ENST00000618027 521 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RFT1Q96AA3 AC119674.1-207ENST00000641355 633 ntBASIC3.07□□□□□ -1.92
RFT1Q96AA3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFT1Q96AA3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFT1Q96AA3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RFT1Q96AA3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFT1Q96AA3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
RFT1Q96AA3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 CCT4P2-201ENST00000233836 1548 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFT1Q96AA3 PPIAP31-201ENST00000405422 495 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AL031121.1-201ENST00000406553 254 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 MTND5P7-201ENST00000413558 1798 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 HSFY4P-201ENST00000415994 1181 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 HSPE1P1-201ENST00000421494 318 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 RPL35AP22-201ENST00000436855 335 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC009969.1-201ENST00000438726 172 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 TPT1P14-201ENST00000448018 505 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFT1Q96AA3 RNA5SP310-201ENST00000459084 116 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AL133162.1-201ENST00000463228 453 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AL049714.1-201ENST00000466686 347 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RFT1Q96AA3 CEACAMP10-202ENST00000495431 496 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC112198.1-201ENST00000505369 1220 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 OR5BM1P-201ENST00000512021 366 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 AP003033.1-201ENST00000527244 415 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 PARP1P2-201ENST00000556806 195 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC007224.1-201ENST00000564410 144 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC011260.1-201ENST00000578420 472 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 RNU1-30P-201ENST00000606575 163 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC103710.4-201ENST00000609301 899 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC002076.2-201ENST00000617362 122 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AL603755.1-201ENST00000619504 163 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 AC098679.4-201ENST00000624241 654 ntBASIC3.06□□□□□ -1.92
RFT1Q96AA3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RFT1Q96AA3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
RFT1Q96AA3 DDX10P1-201ENST00000448545 1933 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 Y_RNA.51-201ENST00000362725 102 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 RNY4P24-201ENST00000362735 96 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 Y_RNA.97-201ENST00000363094 102 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 U3.11-201ENST00000364476 212 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 SNORA70.2-201ENST00000364506 135 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFT1Q96AA3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 SNORD116-9-201ENST00000384000 95 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 SNORD116-3-201ENST00000384287 95 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 SNORD116-7-201ENST00000384404 95 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 SNORD116-5-201ENST00000384462 95 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 SNORD116-4-201ENST00000384733 96 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 RPL5P18-201ENST00000406671 891 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 BX842559.1-201ENST00000419615 532 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 USP9YP36-201ENST00000424581 829 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RFT1Q96AA3 MTND1P29-201ENST00000448112 647 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 AL162389.1-201ENST00000449233 177 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 SNORA70.18-201ENST00000516696 98 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 RNU6-798P-201ENST00000516912 103 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC007954.1-201ENST00000554198 494 ntBASIC3.05□□□□□ -1.92
RFT1Q96AA3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.05□□□□□ -1.92
RFT1Q96AA3 MIR5685-201ENST00000579080 79 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms