Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRF1Q92994 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF1Q92994 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF1Q92994 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
BRF1Q92994 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
BRF1Q92994 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF1Q92994 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
BRF1Q92994 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
BRF1Q92994 RNU1-132P-201ENST00000364300 164 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 RNA5SP509-201ENST00000364577 119 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 RNU6-1029P-201ENST00000384109 107 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 Y_RNA.530-201ENST00000384587 101 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 MIR513A2-201ENST00000385249 127 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRF1Q92994 AL136372.1-201ENST00000403060 228 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 OR6C66P-201ENST00000414917 930 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF1Q92994 RPL35AP22-201ENST00000436855 335 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 AL118520.1-201ENST00000450770 291 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF1Q92994 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF1Q92994 RPL36AP13-201ENST00000457490 317 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 RPL7AP28-201ENST00000464513 571 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 RPS29P19-201ENST00000479709 171 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF1Q92994 AC006499.6-201ENST00000511169 607 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF1Q92994 RNA5SP360-201ENST00000516555 118 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 RNA5SP503-201ENST00000517047 117 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.98□□□□□ -1.61
BRF1Q92994 AL133271.1-201ENST00000538229 291 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF1Q92994 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF1Q92994 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.98□□□□□ -1.61
BRF1Q92994 AC093249.1-201ENST00000567049 203 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 MIR432-201ENST00000606207 94 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.98□□□□□ -1.61
BRF1Q92994 AL133216.2-202ENST00000634512 349 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 LINC01109-201ENST00000603837 3081 ntBASIC4.98□□□□□ -1.61
BRF1Q92994 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
BRF1Q92994 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
BRF1Q92994 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.97□□□□□ -1.61
BRF1Q92994 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
BRF1Q92994 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.97□□□□□ -1.61
BRF1Q92994 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 Y_RNA.301-201ENST00000364990 103 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 RNU5E-6P-201ENST00000365574 115 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
BRF1Q92994 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 MTND2P23-201ENST00000422990 651 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 DNAJC19P7-201ENST00000428811 344 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.97□□□□□ -1.61
BRF1Q92994 ST13P14-201ENST00000474095 734 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 AL592156.1-201ENST00000508758 304 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 AC008958.1-201ENST00000511047 682 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 AC005798.1-201ENST00000513715 387 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 OR5B10P-201ENST00000532869 642 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 AC069240.1-201ENST00000548774 375 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 MIR4277-201ENST00000578298 84 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
BRF1Q92994 AL360085.1-201ENST00000604713 532 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 AC093838.1-201ENST00000613014 469 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.97□□□□□ -1.61
BRF1Q92994 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
BRF1Q92994 FAM91A3P-201ENST00000456826 2544 ntBASIC4.97□□□□□ -1.61
BRF1Q92994 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.97□□□□□ -1.61
BRF1Q92994 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
BRF1Q92994 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
BRF1Q92994 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.97□□□□□ -1.61
BRF1Q92994 BDP1P-201ENST00000582658 1990 ntBASIC4.96□□□□□ -1.61
BRF1Q92994 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
BRF1Q92994 MAPK10-304ENST00000641341 3984 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 MTND4P27-201ENST00000450813 1354 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
BRF1Q92994 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
BRF1Q92994 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.96□□□□□ -1.62
BRF1Q92994 RNU6-754P-201ENST00000391166 107 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 MIR1179-201ENST00000408703 91 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC011933.1-201ENST00000413334 321 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 KCTD9P3-201ENST00000434597 1169 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 GTF2IP13-201ENST00000438487 386 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC005094.1-201ENST00000440420 368 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC073587.1-201ENST00000447093 876 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.96□□□□□ -1.62
BRF1Q92994 AC116533.1-201ENST00000459748 321 ntBASIC4.96□□□□□ -1.62
BRF1Q92994 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.96□□□□□ -1.62
BRF1Q92994 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.96□□□□□ -1.62
BRF1Q92994 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms