Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 XGY1-201ENST00000381172 446 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 RNU6-1005P-201ENST00000384519 107 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC005005.2-201ENST00000420779 380 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 RPS26P30-201ENST00000443431 335 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 RPL23AP23-201ENST00000452590 471 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 MTND2P6-201ENST00000455337 1030 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 PNPLA4P1-201ENST00000458328 305 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC027176.1-201ENST00000560204 514 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC090888.1-201ENST00000561335 1141 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 MIR5002-201ENST00000584713 97 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 APOOP1-201ENST00000604695 592 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 AC092954.1-201ENST00000609121 445 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 MTCO1P18-201ENST00000455518 1419 ntBASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC112Q8NEF3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 RNA5SP27-201ENST00000363839 119 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AL356320.1-201ENST00000429616 163 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 EZH2P1-201ENST00000431167 291 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC004022.1-201ENST00000447766 1066 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 MTND5P8-201ENST00000449817 1083 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 RN7SL636P-201ENST00000497504 294 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC008549.1-201ENST00000512900 643 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC067805.1-201ENST00000559344 470 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AL161629.2-201ENST00000615347 275 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC027309.3-201ENST00000623419 351 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 Z99496.1-201ENST00000469424 1477 ntBASIC2.39□□□□□ -2.03
CCDC112Q8NEF3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 RNU6-461P-201ENST00000364195 107 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 RNU1-73P-201ENST00000383971 164 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 RNU6-198P-201ENST00000384258 104 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 MTND4LP14-201ENST00000429447 288 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AL353705.4-201ENST00000449661 238 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC090515.1-201ENST00000465295 476 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC109329.2-201ENST00000519658 482 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 HIGD1AP6-201ENST00000521833 279 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 MTCYBP20-201ENST00000524239 1129 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 CASP1P1-201ENST00000526345 212 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC079089.3-201ENST00000603094 673 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC046143.2-201ENST00000609789 160 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC104820.1-201ENST00000624183 307 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AC079597.1-201ENST00000624306 508 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 AL590396.2-201ENST00000636511 1041 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 MFSD8-245ENST00000641743 948 ntBASIC2.38□□□□□ -2.03
CCDC112Q8NEF3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC087359.1-201ENST00000508335 1740 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 RNA5SP160-201ENST00000364866 120 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 SNORA3.2-201ENST00000408221 125 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 RNU6-193P-201ENST00000410977 107 ntBASIC2.37□□□□□ -2.03
CCDC112Q8NEF3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms