Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AP005137.2-201ENST00000609238 400 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 TUG1_1.1-201ENST00000610654 145 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC104237.2-201ENST00000612456 443 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC068880.5-201ENST00000624331 290 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 ZNF271P-202ENST00000465539 1970 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC010680.1-201ENST00000590024 3590 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC008669.1-201ENST00000565823 2178 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AL512283.1-201ENST00000606756 1384 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 SUGT1P1-201ENST00000379514 476 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 RNU1-138P-201ENST00000384093 164 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 UBE2V1P2-201ENST00000397758 440 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 FO393413.1-201ENST00000402892 195 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AL162578.1-201ENST00000406202 378 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC019178.2-201ENST00000423595 505 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 RPL7L1P10-201ENST00000427790 463 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC098826.1-201ENST00000433943 471 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 LSM1P1-201ENST00000438629 273 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 RPS12P2-201ENST00000439728 269 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 BTBD7P2-201ENST00000441962 620 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 USP9YP34-201ENST00000453983 808 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 PNPLA4P1-201ENST00000458328 305 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AP000852.1-201ENST00000472460 573 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 RPL36AP51-201ENST00000487216 318 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC023632.1-201ENST00000518463 375 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 CASP1P1-201ENST00000526345 212 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC105224.1-201ENST00000587055 421 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AL035411.2-201ENST00000604022 421 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 DUXAP10-204ENST00000612052 616 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 VN1R7P-201ENST00000619242 903 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC011330.2-201ENST00000621680 635 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC016717.2-201ENST00000609089 5141 ntBASIC2.16□□□□□ -2.06
ZIC4Q8N9L1 AC026241.1-201ENST00000517873 2142 ntBASIC2.15□□□□□ -2.06
ZIC4Q8N9L1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
ZIC4Q8N9L1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 MIR6073-201ENST00000352083 89 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 RNU6-354P-201ENST00000383862 107 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 RNU6-198P-201ENST00000384258 104 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 RNU6-610P-201ENST00000384264 107 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 SNORA41-201ENST00000384675 132 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 MIR135A2-201ENST00000384854 100 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 PTGES3P2-201ENST00000407942 482 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AL512637.2-201ENST00000431287 1256 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 SUMO2P2-201ENST00000456482 255 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC073901.1-201ENST00000462471 408 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 RPS27P27-201ENST00000498779 255 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC113420.1-201ENST00000507903 571 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC010460.2-201ENST00000509054 677 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC103783.1-201ENST00000520506 373 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC044913.1-201ENST00000557200 430 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC093510.2-201ENST00000562820 896 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 LARP7P2-201ENST00000575306 125 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC061975.8-201ENST00000587058 721 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 TPMTP1-201ENST00000592307 737 ntBASIC2.15□□□□□ -2.07
ZIC4Q8N9L1 AC093875.1-201ENST00000623688 504 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms