Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CEP170P1-201ENST00000502249 4587 ntBASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LINC00346Q8IVM7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 SNORA26.8-201ENST00000391306 124 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 MRPL42P2-201ENST00000403169 426 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 RHEBP3-201ENST00000411920 351 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 NPM1P11-201ENST00000417106 855 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 HMGB3P20-201ENST00000417997 600 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC012498.1-201ENST00000424037 437 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC019097.1-201ENST00000424783 735 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC092047.1-201ENST00000424997 240 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL356583.2-201ENST00000426536 280 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC137499.1-201ENST00000427602 88 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 H2AFZP6-201ENST00000444403 394 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 HSFY6P-201ENST00000445573 403 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC006480.1-201ENST00000449887 378 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC140076.1-201ENST00000449897 361 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 RNA5SP269-201ENST00000459032 137 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL160314.1-201ENST00000490836 438 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC010460.1-201ENST00000507087 466 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 PAICSP4-201ENST00000517543 1253 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 RPS3AP4-201ENST00000555161 764 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 MIR5047-201ENST00000579212 100 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL670379.6-201ENST00000603753 252 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL670379.11-201ENST00000604059 253 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 Z94722.1-201ENST00000604328 474 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC008162.1-201ENST00000604718 254 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL670379.1-201ENST00000604752 252 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL670379.5-201ENST00000605253 252 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL670379.12-201ENST00000605291 253 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL670379.8-201ENST00000605353 252 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AL670379.7-201ENST00000605823 252 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC108747.1-201ENST00000609508 535 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 RNA5SP196-201ENST00000625967 102 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 MTND1P37-201ENST00000636562 264 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC010680.1-201ENST00000590024 3590 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 AC073073.2-201ENST00000609827 2578 ntBASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC00346Q8IVM7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 U3.11-201ENST00000364476 212 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 RNY3P13-201ENST00000365542 102 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 RNA5SP424-201ENST00000390988 115 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 Y_RNA.625-201ENST00000411256 107 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 RPS7P13-201ENST00000413955 498 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC098826.1-201ENST00000433943 471 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 SSXP1-201ENST00000453640 473 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AL135752.1-201ENST00000479477 471 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 VN1R105P-201ENST00000486595 910 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 MIR2116-201ENST00000517221 80 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 IGHV3-76-201ENST00000522465 295 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC006960.3-201ENST00000561845 705 ntBASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.28□□□□□ -1.88
LINC00346Q8IVM7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms