Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SNORA70F-201ENST00000384142 135 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 RNU6-505P-201ENST00000384427 107 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 RNU6-1106P-201ENST00000390845 107 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 RNY4P36-201ENST00000391116 96 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 U3.30-201ENST00000391308 210 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 BX323014.1-201ENST00000412876 237 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 PMCHL1-202ENST00000423102 261 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 MED28P3-201ENST00000444288 531 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC107399.1-201ENST00000451226 265 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 DHFRP3-201ENST00000455595 559 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC068587.1-201ENST00000483613 781 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 RPS15AP34-201ENST00000487776 387 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC104136.1-201ENST00000512969 394 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 RNU6-143P-201ENST00000516942 93 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 RNU6-1137P-201ENST00000517073 99 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AP001804.3-201ENST00000525146 880 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC022968.1-201ENST00000567372 442 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 MIR3149-201ENST00000584629 83 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 CTHRC1P1-201ENST00000605383 469 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC087588.2-201ENST00000617667 426 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC112200.1-201ENST00000625015 234 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AC009643.2-201ENST00000603543 1448 ntBASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS4Q8IUM7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 SNORA70.2-201ENST00000364506 135 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC068538.1-201ENST00000376856 336 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 MIR514A1-201ENST00000385133 98 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 RPS12P24-201ENST00000412619 387 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC009310.1-201ENST00000414414 451 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 BX682237.1-201ENST00000415016 335 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC092809.3-201ENST00000415453 231 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 RPL27AP8-201ENST00000424277 446 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AL590383.1-201ENST00000428602 75 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 BX276092.6-201ENST00000430476 250 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AF228730.2-201ENST00000438784 848 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 RPL32P28-201ENST00000443577 397 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AL691482.1-201ENST00000453255 87 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AL645939.1-201ENST00000453429 797 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 BX276092.8-201ENST00000455722 250 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 RNU7-167P-201ENST00000459160 62 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 RNU7-66P-201ENST00000459469 62 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC012181.1-201ENST00000479895 423 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC026979.1-201ENST00000492525 396 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AP001086.1-201ENST00000494882 321 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC023141.12-201ENST00000512399 199 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 RNU6-794P-201ENST00000517261 64 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 HMGB1P19-201ENST00000517578 577 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC090136.1-201ENST00000520009 240 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 COPS8P3-201ENST00000526024 482 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 ATP5F1P5-201ENST00000526403 760 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AL163153.1-201ENST00000554223 283 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC136624.4-201ENST00000573044 370 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 MIR5692A1-201ENST00000580523 69 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 MIR4715-201ENST00000584117 79 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 AC034102.8-201ENST00000615146 484 ntBASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
NPAS4Q8IUM7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms