Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AF127577.6-201ENST00000623352 2191 ntBASIC3.9□□□□□ -1.78
RFX6Q8HWS3 AL157700.1-201ENST00000561973 1432 ntBASIC3.9□□□□□ -1.78
RFX6Q8HWS3 RNU5E-1-201ENST00000362477 120 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 RNU6-213P-201ENST00000384051 104 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 U1.1-201ENST00000384101 164 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 RNU6-821P-201ENST00000390995 107 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC069157.1-201ENST00000421749 137 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 RPL21P109-201ENST00000422213 475 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC005517.2-201ENST00000424673 553 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC019097.1-201ENST00000424783 735 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC119618.1-201ENST00000434191 222 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 HSFY6P-201ENST00000445573 403 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 SNORD121B-201ENST00000458838 81 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 snoU109.4-201ENST00000458953 143 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 ST13P14-201ENST00000474095 734 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 RPS3AP14-201ENST00000483907 780 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC055855.1-201ENST00000489563 579 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 RN7SL323P-201ENST00000494712 295 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AL139099.1-201ENST00000497398 403 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC010587.1-201ENST00000505809 469 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 PRDX4P1-201ENST00000507189 574 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 RNA5SP164-201ENST00000516533 110 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 OR4P1P-201ENST00000530808 1136 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC107954.1-201ENST00000565906 727 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC110741.2-201ENST00000605278 268 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 HMGN2P28-201ENST00000606102 262 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC012531.5-201ENST00000611375 151 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC007014.2-201ENST00000615581 479 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 ZYXP1-201ENST00000617638 118 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AC012150.2-201ENST00000621300 544 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 FP236240.3-201ENST00000623061 327 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 LRRC77P-213ENST00000637727 880 ntBASIC3.9□□□□□ -1.79
RFX6Q8HWS3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RFX6Q8HWS3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.1-201ENST00000352915 104 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 RNU6-989P-201ENST00000362756 107 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 Y_RNA.450-201ENST00000384198 113 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 CALM2P3-201ENST00000400429 449 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 RNA5SP56-201ENST00000410277 118 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 CCDC58P2-201ENST00000417131 366 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC002486.1-201ENST00000435098 391 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 SNRPEP8-201ENST00000442866 260 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 H2AFZP6-201ENST00000444403 394 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 MTND1P9-201ENST00000453775 944 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 MTND1P12-201ENST00000455231 147 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC023598.1-201ENST00000472521 361 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 CEACAMP10-202ENST00000495431 496 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 FCF1P3-201ENST00000496394 590 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC009646.1-201ENST00000510455 318 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC107934.1-201ENST00000522215 217 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 SETP7-201ENST00000552169 453 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AL121579.1-201ENST00000555129 305 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AL669831.4-202ENST00000590817 238 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC020910.2-201ENST00000603635 610 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AL391813.2-201ENST00000609113 322 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 MIR6875-201ENST00000617506 72 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 AC002550.2-201ENST00000621246 394 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX6Q8HWS3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.89□□□□□ -1.79
RFX6Q8HWS3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFX6Q8HWS3 SNORA31-201ENST00000362607 130 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 RNU6-181P-201ENST00000363225 107 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 SNORD6-201ENST00000365444 73 ntBASIC3.88□□□□□ -1.79
RFX6Q8HWS3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms