Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS13CQ709C8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS13CQ709C8 RNU6-113P-201ENST00000516653 101 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC011477.1-204ENST00000623416 1325 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS13CQ709C8 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
VPS13CQ709C8 METTL21EP-201ENST00000298105 713 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 RNA5SP257-201ENST00000363023 116 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 SNORA67.6-201ENST00000391093 99 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 CYCSP33-201ENST00000414485 327 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 Z85995.1-201ENST00000415547 335 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 AC008837.2-201ENST00000513076 418 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 AC067852.7-201ENST00000623270 535 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 RAD23BP2-201ENST00000416003 1207 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 CR383656.8-201ENST00000549046 145 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 PRELID2P1-201ENST00000552837 301 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 AL121917.1-203ENST00000605534 577 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 DUXAP9-208ENST00000622815 614 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 Y_RNA.258-201ENST00000364613 105 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 RNU4-91P-201ENST00000364778 135 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 AC105313.1-201ENST00000509121 353 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 MTCYBP19-201ENST00000517463 1124 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 AL049779.4-201ENST00000604500 156 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS13CQ709C8 AC008133.2-201ENST00000624540 351 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
VPS13CQ709C8 MTND4P1-201ENST00000457501 1466 ntBASIC1.12□□□□□ -2.23
VPS13CQ709C8 AL512430.2-201ENST00000406786 339 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 RPL26P37-201ENST00000411983 438 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 RSL24D1P2-201ENST00000445584 366 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 AC005534.2-201ENST00000431047 433 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 RPL31P41-201ENST00000477967 372 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AC090453.1-201ENST00000495560 436 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 AC087373.1-201ENST00000524920 491 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 MIR3618-201ENST00000580330 88 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL158801.5-201ENST00000623123 465 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 ZNF209P-201ENST00000593450 2304 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 VTRNA1-3-201ENST00000365645 89 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 RNU2-25P-201ENST00000411041 191 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL121594.5-201ENST00000631724 573 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AL450326.2-201ENST00000421913 1962 ntBASIC1.11□□□□□ -2.23
VPS13CQ709C8 AC098799.2-201ENST00000509466 868 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 RN7SKP265-201ENST00000516448 223 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13CQ709C8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.1□□□□□ -2.23
VPS13CQ709C8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13CQ709C8 AL109653.1-201ENST00000603091 248 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AL592494.3-201ENST00000609485 464 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC091152.2-201ENST00000591628 2569 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS13CQ709C8 FABP5P3-201ENST00000437960 408 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC006499.2-201ENST00000513470 337 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 MTND5P4-201ENST00000514978 288 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC105245.1-201ENST00000581934 244 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC090525.3-201ENST00000605601 189 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC083806.3-201ENST00000614016 455 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.1□□□□□ -2.23
VPS13CQ709C8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13CQ709C8 U3.15-201ENST00000365398 212 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 CYCSP48-201ENST00000417124 323 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
VPS13CQ709C8 RNU6-1132P-201ENST00000459214 107 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC104115.2-201ENST00000523026 687 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS13CQ709C8 PDCD5P1-201ENST00000543528 309 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC084364.2-201ENST00000546924 395 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 AC096772.1-201ENST00000609146 564 ntBASIC1.1□□□□□ -2.23
VPS13CQ709C8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
VPS13CQ709C8 AC008850.1-201ENST00000427546 362 ntBASIC1.09□□□□□ -2.23
VPS13CQ709C8 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms