Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC006927.2-201ENST00000639256 389 ntBASIC2.15□□□□□ -2.07
SMARCD3Q6STE5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
SMARCD3Q6STE5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SMARCD3Q6STE5 AC016717.2-201ENST00000609089 5141 ntBASIC2.15□□□□□ -2.07
SMARCD3Q6STE5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SMARCD3Q6STE5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 MTCO1P6-201ENST00000481192 1384 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC062016.1-201ENST00000355719 319 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 OR1L1-202ENST00000373686 1083 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 MIR649-201ENST00000384843 97 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 RPL17P50-201ENST00000396131 546 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC009237.2-201ENST00000421358 284 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC234064.1-201ENST00000436312 247 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC004022.1-201ENST00000447766 1066 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 PNPLA4P1-201ENST00000458328 305 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC090096.1-201ENST00000489168 390 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 SUMO2P5-201ENST00000506790 245 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC109471.1-201ENST00000511631 612 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC124293.1-201ENST00000530034 493 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC010546.1-201ENST00000569391 485 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 MIR4319-201ENST00000577285 85 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 MIR3609-201ENST00000582661 80 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 DNAJC19P3-201ENST00000594491 331 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC124016.2-201ENST00000610058 665 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AC068722.2-201ENST00000618734 544 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 UCA1.1-201ENST00000620952 75 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 AL353748.2-201ENST00000622148 471 ntBASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.14□□□□□ -2.07
SMARCD3Q6STE5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 SNORA5B-201ENST00000363786 132 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 RNU6-443P-201ENST00000384780 107 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 MIR634-201ENST00000385208 97 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AL122016.1-201ENST00000403365 367 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 RNU6-575P-201ENST00000411326 105 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 NUP35P1-201ENST00000422734 947 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 TRBV26-201ENST00000456572 344 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AP001486.1-201ENST00000463339 476 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 MRPL42P6-201ENST00000486397 371 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 RPS27P26-201ENST00000494583 239 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 XKRY-201ENST00000510392 1100 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC026436.1-201ENST00000510537 270 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC018630.1-201ENST00000541376 925 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 MED28P6-201ENST00000558776 231 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC105137.2-201ENST00000569073 466 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC022069.1-201ENST00000582910 658 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 VN1R78P-201ENST00000597393 564 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC007621.1-201ENST00000604544 437 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AP003485.2-201ENST00000623636 610 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC098679.5-201ENST00000624394 571 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 AL049780.3-201ENST00000624612 1583 ntBASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SMARCD3Q6STE5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms