Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
RNF213Q63HN8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
RNF213Q63HN8 AC111188.2-201ENST00000529697 1387 ntBASIC0.81□□□□□ -2.28
RNF213Q63HN8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.81□□□□□ -2.28
RNF213Q63HN8 AL512504.1-201ENST00000415494 778 ntBASIC0.81□□□□□ -2.28
RNF213Q63HN8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC0.81□□□□□ -2.28
RNF213Q63HN8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC0.81□□□□□ -2.28
RNF213Q63HN8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC0.81□□□□□ -2.28
RNF213Q63HN8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC0.81□□□□□ -2.28
RNF213Q63HN8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC0.81□□□□□ -2.28
RNF213Q63HN8 AC098679.5-201ENST00000624394 571 ntBASIC0.81□□□□□ -2.28
RNF213Q63HN8 ZNF720P1-201ENST00000562403 1939 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC005336.3-201ENST00000623833 2679 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 RPL27AP8-201ENST00000424277 446 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC138473.1-201ENST00000605717 526 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 AL596028.1-201ENST00000326971 197 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RNF213Q63HN8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 TRAV28-201ENST00000557548 323 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 MIR4506-201ENST00000584693 77 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 BNIP3P4-201ENST00000604946 565 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 MTCO1P14-201ENST00000441695 1559 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC009812.4-201ENST00000569134 1805 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RNF213Q63HN8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RNF213Q63HN8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RNF213Q63HN8 MIR517C-201ENST00000385103 95 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC092851.1-201ENST00000535964 478 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 MIR4644-201ENST00000579929 84 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC013553.2-201ENST00000604244 589 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 U4.2-201ENST00000618561 85 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 RNF6P1-201ENST00000444889 1784 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 RNU6-716P-201ENST00000365621 103 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 MIR222-201ENST00000384992 110 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 SSXP10-201ENST00000402595 565 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 MTCO3P30-201ENST00000426425 670 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 TPMTP1-201ENST00000592307 737 ntBASIC0.8□□□□□ -2.28
RNF213Q63HN8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC0.8□□□□□ -2.28
RNF213Q63HN8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
RNF213Q63HN8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.79□□□□□ -2.28
RNF213Q63HN8 RNU7-170P-201ENST00000459303 61 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC023790.1-201ENST00000482174 347 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 RPL21P131-201ENST00000497298 483 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 MTCO3P44-201ENST00000510977 541 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 RNU4-60P-201ENST00000517239 135 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RNF213Q63HN8 MIR4419B-201ENST00000577260 68 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC060766.3-201ENST00000591442 263 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC010297.1-201ENST00000623948 149 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 RPL23AP48-201ENST00000406913 488 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AL445687.1-201ENST00000439946 251 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 VN1R96P-201ENST00000446052 858 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC104307.1-201ENST00000616142 196 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC004865.1-201ENST00000442276 1003 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 XKRY2-201ENST00000442362 1093 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.79□□□□□ -2.28
RNF213Q63HN8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC0.79□□□□□ -2.28
RNF213Q63HN8 MIR1265-201ENST00000408444 86 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 RNA5SP118-201ENST00000410385 109 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AL159169.1-201ENST00000421119 127 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC119618.1-201ENST00000434191 222 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC090774.1-201ENST00000435925 246 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 MUPP-201ENST00000438111 566 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 MTCO1P53-201ENST00000441633 699 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AL021397.1-201ENST00000451806 248 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC0.79□□□□□ -2.28
RNF213Q63HN8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.79□□□□□ -2.28
RNF213Q63HN8 RPL23AP78-201ENST00000599928 470 ntBASIC0.79□□□□□ -2.28
RNF213Q63HN8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC0.79□□□□□ -2.28
RNF213Q63HN8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
RNF213Q63HN8 RNA5SP266-201ENST00000410273 108 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 AF274854.1-201ENST00000413236 615 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC0.78□□□□□ -2.28
RNF213Q63HN8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.78□□□□□ -2.28
RNF213Q63HN8 AC004486.1-201ENST00000546846 233 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 AC025946.2-201ENST00000603398 234 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 MKKS-204ENST00000639674 192 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 MTND4P12-201ENST00000498999 1377 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 AL137003.2-201ENST00000606924 2538 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 RNU1-78P-201ENST00000391248 165 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 AC129850.1-201ENST00000436203 508 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 HIGD1AP11-201ENST00000438361 280 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
RNF213Q63HN8 Y_RNA.35-201ENST00000362601 101 ntBASIC0.78□□□□□ -2.28
RNF213Q63HN8 RNU6-670P-201ENST00000364312 104 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms