Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC018462.2-201ENST00000605375 395 ntBASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC011755.1-201ENST00000623763 2049 ntBASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL137003.2-201ENST00000606924 2538 ntBASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC027228.2-201ENST00000567141 2154 ntBASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 MAPK10-338ENST00000641647 3362 ntBASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC104118.1-201ENST00000607625 1589 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RN7SKP104-201ENST00000362605 328 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.149-201ENST00000363558 117 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 Y_RNA.496-201ENST00000384444 101 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-95P-201ENST00000384697 107 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 SNORA75.6-201ENST00000391318 127 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC110754.1-201ENST00000399740 601 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 SSXP9-201ENST00000417503 292 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC114482.1-201ENST00000418010 247 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPS27AP12-201ENST00000429552 465 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL23AP69-201ENST00000431134 458 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC004866.2-201ENST00000438285 481 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL772161.1-201ENST00000439130 476 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL731563.1-201ENST00000442202 214 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 OR1H1P-201ENST00000448731 937 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 GSTA11P-201ENST00000452866 669 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL356981.1-201ENST00000454879 684 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPS17P2-201ENST00000461663 408 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC093270.2-201ENST00000486157 792 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 HMGB1P30-201ENST00000492455 606 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 MRPS33P2-201ENST00000507850 322 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RNU6-120P-201ENST00000516077 103 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RN7SKP234-201ENST00000517173 224 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 FTH1P11-201ENST00000517577 551 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 RPL23AP53-201ENST00000521854 457 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC021006.3-201ENST00000530771 192 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 MIR6130-201ENST00000619419 109 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 U4.1-201ENST00000620349 87 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 Z69720.2-201ENST00000624755 279 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 AL136164.3-201ENST00000624429 3978 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 IRF5P1-201ENST00000504852 2164 ntBASIC4.53□□□□□ -1.68
HLA-DQA1Q5Y7H0 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.69
HLA-DQA1Q5Y7H0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RN7SKP103-201ENST00000363848 320 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-306P-201ENST00000384617 107 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-14P-201ENST00000384630 106 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-178P-201ENST00000384631 104 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL357515.1-201ENST00000402967 542 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 MIR1250-201ENST00000408098 113 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC114755.2-201ENST00000413520 361 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 GNG5P5-201ENST00000420444 220 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 NUP35P1-201ENST00000422734 947 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC096644.2-201ENST00000429278 159 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNU6-470P-201ENST00000515954 104 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RNA5SP249-201ENST00000516127 99 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 RN7SKP60-201ENST00000516985 239 ntBASIC4.52□□□□□ -1.69
HLA-DQA1Q5Y7H0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms