Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC239860.2-201ENST00000525886 270 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 ACTR3BP3-201ENST00000565577 979 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 RN7SL793P-201ENST00000583259 296 ntBASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
VPS13DQ5THJ4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
VPS13DQ5THJ4 SNORD56.5-201ENST00000364281 72 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AL445669.1-201ENST00000426743 755 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC022790.1-201ENST00000522872 204 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC006023.2-201ENST00000609916 167 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 OR4G1P-203ENST00000641984 1631 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
VPS13DQ5THJ4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 SEC63P1-201ENST00000425785 1258 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 CD24P2-201ENST00000565486 219 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AL158801.5-201ENST00000623123 465 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
VPS13DQ5THJ4 NUP58P1-201ENST00000502546 1738 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1□□□□□ -2.25
VPS13DQ5THJ4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC104308.1-201ENST00000454621 333 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC135279.1-201ENST00000543493 504 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1□□□□□ -2.25
VPS13DQ5THJ4 AC136443.5-201ENST00000603741 370 ntBASIC1□□□□□ -2.25
VPS13DQ5THJ4 AP000873.1-201ENST00000463987 400 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AC025755.1-201ENST00000521306 278 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 MIR524-201ENST00000385242 87 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AC022431.1-201ENST00000450941 438 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AC069528.1-202ENST00000482888 637 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AC084364.2-201ENST00000546924 395 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 MIR4716-201ENST00000579628 84 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 RNU6-1032P-201ENST00000384100 107 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AL353770.2-201ENST00000620024 78 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 RPL23AP29-201ENST00000397284 453 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 MIR548J-201ENST00000408833 112 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AL645568.3-201ENST00000433683 316 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 ARL2BPP4-201ENST00000506854 471 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AC005730.3-201ENST00000583067 366 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 DUXAP4-201ENST00000603046 613 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 MIR502-201ENST00000606349 86 ntBASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC0.99□□□□□ -2.25
VPS13DQ5THJ4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 CYCSP33-201ENST00000414485 327 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 BX682237.1-201ENST00000415016 335 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC090453.1-201ENST00000495560 436 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC021146.7-201ENST00000509604 775 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 RNA5SP436-201ENST00000516020 115 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 NIFKP8-201ENST00000560500 874 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC090425.2-201ENST00000608818 501 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 RNA5SP489-201ENST00000410986 109 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 LSM1P1-201ENST00000438629 273 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 SNHG22-203ENST00000617833 660 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 SNORA31-201ENST00000362607 130 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 RNA5SP393-201ENST00000363423 117 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 MIR758-201ENST00000390227 88 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 SNORA67.6-201ENST00000391093 99 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 ERHP2-201ENST00000402323 299 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 OR10R1P-201ENST00000441524 1141 ntBASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.98□□□□□ -2.25
VPS13DQ5THJ4 AC106901.1-201ENST00000425086 698 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 MTCO3P44-201ENST00000510977 541 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 RNU6-56P-201ENST00000516986 93 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 RNU1-104P-201ENST00000517280 175 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 HSPE1P11-201ENST00000339579 310 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 RPL26P37-201ENST00000411983 438 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 RPS6P15-201ENST00000431996 751 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AL121871.1-201ENST00000443413 436 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 MTCO1P30-201ENST00000515244 580 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 SNORD116-26-201ENST00000516006 96 ntBASIC0.97□□□□□ -2.25
VPS13DQ5THJ4 AC084757.1-201ENST00000559987 490 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms