Protein–RNA interactions for Protein: Q13509

TUBB3, Tubulin beta-3 chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3Q13509 MTND1P11-201ENST00000456661 876 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 AMD1P1-201ENST00000457220 922 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 PMCHL2-203ENST00000457791 237 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 RNU6-261P-201ENST00000459506 102 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TUBB3Q13509 RPL39P36-201ENST00000490784 156 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.11□□□□□ -1.75
TUBB3Q13509 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.11□□□□□ -1.75
TUBB3Q13509 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.11□□□□□ -1.75
TUBB3Q13509 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.11□□□□□ -1.75
TUBB3Q13509 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.11□□□□□ -1.75
TUBB3Q13509 AC026402.1-201ENST00000513642 170 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 RNA5SP315-201ENST00000516340 116 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 RNA5SP312-201ENST00000517068 116 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 IGKV2-38-201ENST00000517443 247 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 OR4R3P-201ENST00000525084 838 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 OR4R1P-201ENST00000529879 463 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.11□□□□□ -1.75
TUBB3Q13509 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.11□□□□□ -1.75
TUBB3Q13509 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.11□□□□□ -1.75
TUBB3Q13509 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.11□□□□□ -1.75
TUBB3Q13509 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.11□□□□□ -1.75
TUBB3Q13509 AC055876.1-202ENST00000567053 138 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 AC005255.1-201ENST00000593748 216 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 VN1R85P-201ENST00000601587 426 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 AC006504.8-201ENST00000621046 635 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 AL445363.3-201ENST00000623080 671 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 AC138649.5-201ENST00000637456 137 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 MIR492-201ENST00000638676 116 ntBASIC4.11□□□□□ -1.75
TUBB3Q13509 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TUBB3Q13509 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.11□□□□□ -1.75
TUBB3Q13509 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TUBB3Q13509 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TUBB3Q13509 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.11□□□□□ -1.75
TUBB3Q13509 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.1□□□□□ -1.75
TUBB3Q13509 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TUBB3Q13509 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TUBB3Q13509 AL133243.3-201ENST00000617415 3004 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TUBB3Q13509 RNU1-14P-201ENST00000362759 152 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 MIR708-201ENST00000390708 88 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AL591416.1-201ENST00000404015 867 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 RNU2-47P-201ENST00000410649 186 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 RNU6-1068P-201ENST00000410958 103 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.1□□□□□ -1.75
TUBB3Q13509 AC005517.2-201ENST00000424673 553 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AL157831.1-201ENST00000426134 473 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 COX6B1P7-201ENST00000430845 235 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.1□□□□□ -1.75
TUBB3Q13509 AC140076.1-201ENST00000449897 361 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.1□□□□□ -1.75
TUBB3Q13509 AL121877.1-201ENST00000453704 622 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC108059.3-201ENST00000456388 214 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.1□□□□□ -1.75
TUBB3Q13509 HMGB3P30-201ENST00000457863 606 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.1□□□□□ -1.75
TUBB3Q13509 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.1□□□□□ -1.75
TUBB3Q13509 RPS20P20-201ENST00000460498 340 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AL049714.1-201ENST00000466686 347 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 HMGB1P25-201ENST00000468402 607 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
TUBB3Q13509 AC233702.1-201ENST00000482905 502 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.1□□□□□ -1.75
TUBB3Q13509 RPS27AP13-201ENST00000498403 237 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.1□□□□□ -1.75
TUBB3Q13509 PCBP2P3-201ENST00000509726 843 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 LRRC34P2-201ENST00000514850 553 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 RNA5SP401-201ENST00000515920 127 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.1□□□□□ -1.75
TUBB3Q13509 AL133271.1-201ENST00000538229 291 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC063950.1-201ENST00000552036 308 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.1□□□□□ -1.75
TUBB3Q13509 AC105224.1-201ENST00000587055 421 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AL356055.1-201ENST00000602528 446 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AL161729.3-201ENST00000603533 673 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC112230.1-201ENST00000604342 547 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 FAM27D1-201ENST00000612308 341 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC010338.1-201ENST00000621823 717 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.1□□□□□ -1.75
TUBB3Q13509 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TUBB3Q13509 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TUBB3Q13509 PNPT1P2-201ENST00000456768 2050 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 MARK2P15-201ENST00000432204 2186 ntBASIC4.1□□□□□ -1.75
TUBB3Q13509 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TUBB3Q13509 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.09□□□□□ -1.75
TUBB3Q13509 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.09□□□□□ -1.75
TUBB3Q13509 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.09□□□□□ -1.75
TUBB3Q13509 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.09□□□□□ -1.75
TUBB3Q13509 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TUBB3Q13509 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TUBB3Q13509 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.09□□□□□ -1.75
TUBB3Q13509 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TUBB3Q13509 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TUBB3Q13509 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.09□□□□□ -1.75
TUBB3Q13509 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TUBB3Q13509 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TUBB3Q13509 SPRR2C-201ENST00000290702 219 ntBASIC4.09□□□□□ -1.75
TUBB3Q13509 RNU6-1078P-201ENST00000364522 103 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms