Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TOP2BQ02880 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.49□□□□□ -2.01
TOP2BQ02880 Y_RNA.30-201ENST00000362572 97 ntBASIC2.49□□□□□ -2.01
TOP2BQ02880 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.49□□□□□ -2.01
TOP2BQ02880 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.49□□□□□ -2.01
TOP2BQ02880 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.49□□□□□ -2.01
TOP2BQ02880 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.49□□□□□ -2.01
TOP2BQ02880 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.49□□□□□ -2.01
TOP2BQ02880 AL353770.2-201ENST00000620024 78 ntBASIC2.49□□□□□ -2.01
TOP2BQ02880 AL158801.5-201ENST00000623123 465 ntBASIC2.49□□□□□ -2.01
TOP2BQ02880 NUP58P1-201ENST00000502546 1738 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 RNU4-41P-201ENST00000364426 143 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 RPL23AP29-201ENST00000397284 453 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 HSPE1P26-201ENST00000405341 275 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 AC073264.1-201ENST00000411508 416 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 AL354695.1-201ENST00000427935 228 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.48□□□□□ -2.01
TOP2BQ02880 OR51B8P-201ENST00000449892 769 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.48□□□□□ -2.01
TOP2BQ02880 RPS29P20-201ENST00000489592 171 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 AC012170.1-201ENST00000495139 359 ntBASIC2.48□□□□□ -2.01
TOP2BQ02880 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.48□□□□□ -2.01
TOP2BQ02880 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.48□□□□□ -2.01
TOP2BQ02880 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.48□□□□□ -2.01
TOP2BQ02880 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TOP2BQ02880 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
TOP2BQ02880 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.47□□□□□ -2.01
TOP2BQ02880 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 AC092832.1-201ENST00000422934 400 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 RPL21P39-201ENST00000463605 483 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 AP000873.1-201ENST00000463987 400 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.47□□□□□ -2.01
TOP2BQ02880 RNU1-92P-201ENST00000517017 135 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 AC022790.1-201ENST00000522872 204 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 AP005137.2-201ENST00000609238 400 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.47□□□□□ -2.01
TOP2BQ02880 MIR6788-201ENST00000618842 66 ntBASIC2.47□□□□□ -2.01
TOP2BQ02880 MIR591-201ENST00000385290 95 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.46□□□□□ -2.02
TOP2BQ02880 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.46□□□□□ -2.02
TOP2BQ02880 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.46□□□□□ -2.02
TOP2BQ02880 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TOP2BQ02880 MTND4LP22-201ENST00000508209 276 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 AL359273.1-201ENST00000510918 627 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.46□□□□□ -2.02
TOP2BQ02880 AC002487.1-201ENST00000604565 994 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TOP2BQ02880 AL136164.4-201ENST00000625013 2135 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 ZNF209P-201ENST00000593450 2304 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TOP2BQ02880 MIR124-3-201ENST00000384866 87 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 SNRPEP2-201ENST00000397592 279 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 HMGB3P30-201ENST00000457863 606 ntBASIC2.46□□□□□ -2.02
TOP2BQ02880 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.46□□□□□ -2.02
TOP2BQ02880 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.46□□□□□ -2.02
TOP2BQ02880 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TOP2BQ02880 U8.1-201ENST00000362843 134 ntBASIC2.45□□□□□ -2.02
TOP2BQ02880 Z85995.1-201ENST00000415547 335 ntBASIC2.45□□□□□ -2.02
TOP2BQ02880 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TOP2BQ02880 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.45□□□□□ -2.02
TOP2BQ02880 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TOP2BQ02880 UBE2V2P1-201ENST00000434717 398 ntBASIC2.45□□□□□ -2.02
TOP2BQ02880 VN1R96P-201ENST00000446052 858 ntBASIC2.45□□□□□ -2.02
TOP2BQ02880 AC034244.1-201ENST00000507687 207 ntBASIC2.45□□□□□ -2.02
TOP2BQ02880 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP2BQ02880 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
TOP2BQ02880 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.45□□□□□ -2.02
TOP2BQ02880 AC006270.2-201ENST00000578523 652 ntBASIC2.45□□□□□ -2.02
TOP2BQ02880 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
TOP2BQ02880 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.44□□□□□ -2.02
TOP2BQ02880 AC013268.2-201ENST00000420753 337 ntBASIC2.44□□□□□ -2.02
TOP2BQ02880 MTND2P2-201ENST00000434633 945 ntBASIC2.44□□□□□ -2.02
TOP2BQ02880 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.44□□□□□ -2.02
TOP2BQ02880 MTCYBP37-201ENST00000510642 1133 ntBASIC2.44□□□□□ -2.02
TOP2BQ02880 RN7SKP5-201ENST00000517045 272 ntBASIC2.44□□□□□ -2.02
TOP2BQ02880 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC2.44□□□□□ -2.02
TOP2BQ02880 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
TOP2BQ02880 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.43□□□□□ -2.02
TOP2BQ02880 OR8X1P-201ENST00000534542 869 ntBASIC2.43□□□□□ -2.02
TOP2BQ02880 AL121839.1-201ENST00000556233 1185 ntBASIC2.43□□□□□ -2.02
TOP2BQ02880 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.43□□□□□ -2.02
TOP2BQ02880 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TOP2BQ02880 SNHG22-203ENST00000617833 660 ntBASIC2.43□□□□□ -2.02
TOP2BQ02880 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TOP2BQ02880 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
TOP2BQ02880 HMGB1P13-201ENST00000406019 642 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 AL357078.2-201ENST00000416486 427 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 RPS15AP7-201ENST00000439294 405 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 CASP3P1-201ENST00000446037 609 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TOP2BQ02880 LDHBP3-201ENST00000514909 822 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 OR4V1P-201ENST00000525394 1140 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 MIR4716-201ENST00000579628 84 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 MIR6078-201ENST00000611069 100 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 AL133216.2-202ENST00000634512 349 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TOP2BQ02880 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
TOP2BQ02880 RBBP8P1-201ENST00000449447 1844 ntBASIC2.42□□□□□ -2.02
TOP2BQ02880 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TOP2BQ02880 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms