Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL136133.1-201ENST00000413694 376 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 MORF4L1P6-201ENST00000418771 268 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC008173.1-201ENST00000418901 264 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HOXC5Q00444 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC5Q00444 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC5Q00444 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXC5Q00444 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC5Q00444 AL049714.1-201ENST00000466686 347 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 RPL23AP49-201ENST00000492925 468 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 RPS27P26-201ENST00000494583 239 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC5Q00444 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
HOXC5Q00444 AC103783.1-201ENST00000520506 373 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC5Q00444 OR5AK1P-201ENST00000524837 922 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AP000916.1-201ENST00000533869 835 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC009097.3-201ENST00000563557 1018 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC010546.1-201ENST00000569391 485 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC079089.3-201ENST00000603094 673 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC007938.3-201ENST00000604965 623 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC097504.2-201ENST00000608088 454 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC068880.5-201ENST00000624331 290 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC5Q00444 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
HOXC5Q00444 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HOXC5Q00444 AL359693.1-201ENST00000614959 2407 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 MTND5P6-201ENST00000422338 1798 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC087359.1-201ENST00000508335 1740 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HOXC5Q00444 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 RNU6-582P-201ENST00000362989 107 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 SET-203ENST00000372688 801 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXC5Q00444 OR1L1-202ENST00000373686 1083 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 XGY1-201ENST00000381172 446 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 SNORD116-23-201ENST00000384645 92 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 RNU2-47P-201ENST00000410649 186 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC007064.1-201ENST00000412238 351 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 Z75741.2-201ENST00000417272 1167 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 PTP4A1P7-201ENST00000423476 514 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 ZFAND6P1-201ENST00000434138 605 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC5Q00444 AC234064.1-201ENST00000436312 247 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC5Q00444 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC5Q00444 HIGD1AP2-201ENST00000446367 280 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 RBM43P1-201ENST00000476891 1081 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXC5Q00444 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.01□□□□□ -2.09
HOXC5Q00444 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HOXC5Q00444 HMGB3P3-201ENST00000510526 400 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 RNU6-928P-201ENST00000516876 104 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 RNU6-798P-201ENST00000516912 103 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AP003122.3-201ENST00000526316 255 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC5Q00444 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC5Q00444 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC5Q00444 AC008127.2-201ENST00000549925 1075 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 VN1R78P-201ENST00000597393 564 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC040174.2-201ENST00000602701 465 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC133794.1-201ENST00000602731 914 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC5Q00444 AL136363.1-201ENST00000605349 337 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AC107294.1-201ENST00000609524 467 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 AL590396.4-201ENST00000636779 956 ntBASIC2.01□□□□□ -2.09
HOXC5Q00444 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
HOXC5Q00444 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2□□□□□ -2.09
HOXC5Q00444 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2□□□□□ -2.09
HOXC5Q00444 GDI2P1-201ENST00000429312 1336 ntBASIC2□□□□□ -2.09
HOXC5Q00444 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC5Q00444 OR5T3-201ENST00000303059 1023 ntBASIC2□□□□□ -2.09
HOXC5Q00444 RNU6-525P-201ENST00000363685 104 ntBASIC2□□□□□ -2.09
HOXC5Q00444 RNU6-481P-201ENST00000384194 107 ntBASIC2□□□□□ -2.09
HOXC5Q00444 RNU4-27P-201ENST00000410889 139 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC096533.1-201ENST00000411645 353 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2□□□□□ -2.09
HOXC5Q00444 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2□□□□□ -2.09
HOXC5Q00444 AC092427.1-202ENST00000430569 476 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2□□□□□ -2.09
HOXC5Q00444 AC024082.2-201ENST00000434771 238 ntBASIC2□□□□□ -2.09
HOXC5Q00444 ARPC3P1-201ENST00000437218 533 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AL050341.1-201ENST00000447743 313 ntBASIC2□□□□□ -2.09
HOXC5Q00444 DPPA3P1-201ENST00000448050 469 ntBASIC2□□□□□ -2.09
HOXC5Q00444 RPL23AP7-203ENST00000449021 469 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2□□□□□ -2.09
HOXC5Q00444 RPL21P47-201ENST00000483696 477 ntBASIC2□□□□□ -2.09
HOXC5Q00444 RPS15AP34-201ENST00000487776 387 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC090096.1-201ENST00000489168 390 ntBASIC2□□□□□ -2.09
HOXC5Q00444 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms