Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL022400.1-201ENST00000423946 935 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 WARS2P1-201ENST00000429678 537 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC0.95□□□□□ -2.26
HSPG2P98160 AC069528.1-202ENST00000482888 637 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 SNORA31.26-201ENST00000517250 137 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 AC019176.1-201ENST00000518519 225 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 MIR4419B-201ENST00000577260 68 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 XIST_intron.1-201ENST00000619444 68 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.95□□□□□ -2.26
HSPG2P98160 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HSPG2P98160 AC000367.1-201ENST00000452711 1766 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 DDX43P2-201ENST00000604753 1354 ntBASIC0.95□□□□□ -2.26
HSPG2P98160 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HSPG2P98160 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HSPG2P98160 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.94□□□□□ -2.26
HSPG2P98160 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.94□□□□□ -2.26
HSPG2P98160 AC021146.7-201ENST00000509604 775 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.94□□□□□ -2.26
HSPG2P98160 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.94□□□□□ -2.26
HSPG2P98160 AC087241.2-201ENST00000535801 324 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.94□□□□□ -2.26
HSPG2P98160 MIR502-201ENST00000606349 86 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.94□□□□□ -2.26
HSPG2P98160 FO624990.1-201ENST00000636373 85 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HSPG2P98160 RPS6P15-201ENST00000431996 751 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 HMGB1P45-201ENST00000435986 653 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC0.94□□□□□ -2.26
HSPG2P98160 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.94□□□□□ -2.26
HSPG2P98160 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.94□□□□□ -2.26
HSPG2P98160 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.94□□□□□ -2.26
HSPG2P98160 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC0.94□□□□□ -2.26
HSPG2P98160 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HSPG2P98160 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC0.94□□□□□ -2.26
HSPG2P98160 RNU6-37P-201ENST00000362692 107 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 RNU6-11P-201ENST00000364234 107 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC0.94□□□□□ -2.26
HSPG2P98160 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
HSPG2P98160 AL031659.1-201ENST00000447075 539 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.94□□□□□ -2.26
HSPG2P98160 AC012493.3-201ENST00000604494 112 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 RNU4-41P-201ENST00000364426 143 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 RPS15AP1-201ENST00000457423 391 ntBASIC0.94□□□□□ -2.26
HSPG2P98160 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC0.94□□□□□ -2.26
HSPG2P98160 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.94□□□□□ -2.26
HSPG2P98160 CNOT6LP1-201ENST00000559681 1462 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 RNA5SP257-201ENST00000363023 116 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
HSPG2P98160 Y_RNA.433-201ENST00000384089 102 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 THAP5P1-201ENST00000439089 262 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 RFC5P1-201ENST00000454419 874 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC087190.1-201ENST00000484462 480 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC021087.2-201ENST00000504656 1203 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.93□□□□□ -2.26
HSPG2P98160 STMN1P1-201ENST00000617809 440 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
HSPG2P98160 Y_RNA.115-201ENST00000363272 98 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HSPG2P98160 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.93□□□□□ -2.26
HSPG2P98160 AC092832.1-201ENST00000422934 400 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC0.93□□□□□ -2.26
HSPG2P98160 AC005297.2-201ENST00000450430 606 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.93□□□□□ -2.26
HSPG2P98160 AC005912.1-201ENST00000495392 255 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 MIR514B-201ENST00000516774 80 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC0.93□□□□□ -2.26
HSPG2P98160 SETP7-201ENST00000552169 453 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC124283.4-201ENST00000581815 456 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC004943.3-201ENST00000624116 600 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC009452.1-201ENST00000640823 606 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
HSPG2P98160 RNA5SP62-201ENST00000363457 110 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AL096701.2-201ENST00000416920 238 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.93□□□□□ -2.26
HSPG2P98160 RPL7P53-201ENST00000421245 739 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 GTF2IP7-202ENST00000436677 309 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC0.93□□□□□ -2.26
HSPG2P98160 AC022431.1-201ENST00000450941 438 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC098799.2-201ENST00000509466 868 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC087373.1-201ENST00000524920 491 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.93□□□□□ -2.26
HSPG2P98160 AC105245.1-201ENST00000581934 244 ntBASIC0.93□□□□□ -2.26
HSPG2P98160 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC0.93□□□□□ -2.26
HSPG2P98160 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.93□□□□□ -2.26
HSPG2P98160 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
HSPG2P98160 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.93□□□□□ -2.26
HSPG2P98160 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
HSPG2P98160 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
HSPG2P98160 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC0.92□□□□□ -2.26
HSPG2P98160 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC0.92□□□□□ -2.26
HSPG2P98160 MTND5P4-201ENST00000514978 288 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC068135.2-201ENST00000569293 1028 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.92□□□□□ -2.26
HSPG2P98160 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AC097504.2-201ENST00000608088 454 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 AL592494.3-201ENST00000609485 464 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.92□□□□□ -2.26
HSPG2P98160 ZNF209P-201ENST00000593450 2304 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms