Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Y_RNA.153-201ENST00000363615 91 ntBASIC4.62□□□□□ -1.67
YBX1P67809 Y_RNA.556-201ENST00000384677 113 ntBASIC4.62□□□□□ -1.67
YBX1P67809 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
YBX1P67809 RNU1-82P-201ENST00000390851 165 ntBASIC4.62□□□□□ -1.67
YBX1P67809 U3.35-201ENST00000408405 208 ntBASIC4.62□□□□□ -1.67
YBX1P67809 RNU2-3P-201ENST00000410144 191 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.62□□□□□ -1.67
YBX1P67809 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
YBX1P67809 AL353691.1-201ENST00000451332 387 ntBASIC4.62□□□□□ -1.67
YBX1P67809 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.62□□□□□ -1.67
YBX1P67809 snoU13.7-201ENST00000459220 104 ntBASIC4.62□□□□□ -1.67
YBX1P67809 RPS20P21-201ENST00000466859 343 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC006967.1-201ENST00000467608 589 ntBASIC4.62□□□□□ -1.67
YBX1P67809 HMGB1P21-201ENST00000502313 581 ntBASIC4.62□□□□□ -1.67
YBX1P67809 COX7A2P2-201ENST00000505291 250 ntBASIC4.62□□□□□ -1.67
YBX1P67809 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.62□□□□□ -1.67
YBX1P67809 AC107222.1-201ENST00000510899 637 ntBASIC4.62□□□□□ -1.67
YBX1P67809 TBCAP3-201ENST00000512475 312 ntBASIC4.62□□□□□ -1.67
YBX1P67809 RNU6-64P-201ENST00000517119 105 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.62□□□□□ -1.67
YBX1P67809 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.62□□□□□ -1.67
YBX1P67809 FKBP1BP1-201ENST00000553366 325 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC106782.4-201ENST00000568264 210 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC113195.1-201ENST00000579952 141 ntBASIC4.62□□□□□ -1.67
YBX1P67809 MIR3667-201ENST00000581025 74 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.62□□□□□ -1.67
YBX1P67809 MIR4737-201ENST00000583979 81 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC234771.5-201ENST00000600161 514 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC009229.3-201ENST00000608056 282 ntBASIC4.62□□□□□ -1.67
YBX1P67809 AC005086.4-201ENST00000623065 213 ntBASIC4.62□□□□□ -1.67
YBX1P67809 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
YBX1P67809 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.62□□□□□ -1.67
YBX1P67809 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.62□□□□□ -1.67
YBX1P67809 AC108751.5-201ENST00000492880 1336 ntBASIC4.62□□□□□ -1.67
YBX1P67809 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
YBX1P67809 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
YBX1P67809 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.62□□□□□ -1.67
YBX1P67809 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
YBX1P67809 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
YBX1P67809 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
YBX1P67809 ZNF734P-201ENST00000419494 1534 ntBASIC4.62□□□□□ -1.67
YBX1P67809 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
YBX1P67809 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
YBX1P67809 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
YBX1P67809 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.61□□□□□ -1.67
YBX1P67809 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
YBX1P67809 RNU1-130P-201ENST00000363930 160 ntBASIC4.61□□□□□ -1.67
YBX1P67809 RNU6-550P-201ENST00000391057 101 ntBASIC4.61□□□□□ -1.67
YBX1P67809 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.61□□□□□ -1.67
YBX1P67809 RNA5SP107-201ENST00000411358 122 ntBASIC4.61□□□□□ -1.67
YBX1P67809 RPL30P2-201ENST00000414021 291 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC080125.1-201ENST00000414888 684 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.61□□□□□ -1.67
YBX1P67809 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.61□□□□□ -1.67
YBX1P67809 HMGB1P12-201ENST00000438594 598 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC127537.2-201ENST00000439258 465 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.61□□□□□ -1.67
YBX1P67809 RPL21P8-201ENST00000465083 535 ntBASIC4.61□□□□□ -1.67
YBX1P67809 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.61□□□□□ -1.67
YBX1P67809 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
YBX1P67809 SCARNA22-201ENST00000503991 125 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.61□□□□□ -1.67
YBX1P67809 RN7SKP276-201ENST00000516242 268 ntBASIC4.61□□□□□ -1.67
YBX1P67809 RN7SKP82-201ENST00000516786 223 ntBASIC4.61□□□□□ -1.67
YBX1P67809 Y_RNA.708-201ENST00000516950 96 ntBASIC4.61□□□□□ -1.67
YBX1P67809 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC087854.1-201ENST00000519706 414 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC092470.1-201ENST00000546187 132 ntBASIC4.61□□□□□ -1.67
YBX1P67809 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.61□□□□□ -1.67
YBX1P67809 AC005357.1-201ENST00000588399 301 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC005191.1-201ENST00000603950 358 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC104695.3-201ENST00000604052 296 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC025588.3-201ENST00000604182 274 ntBASIC4.61□□□□□ -1.67
YBX1P67809 AC018889.1-201ENST00000605372 397 ntBASIC4.61□□□□□ -1.67
YBX1P67809 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
YBX1P67809 AL445363.3-201ENST00000623080 671 ntBASIC4.61□□□□□ -1.67
YBX1P67809 CR381572.2-201ENST00000624852 397 ntBASIC4.61□□□□□ -1.67
YBX1P67809 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.61□□□□□ -1.67
YBX1P67809 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
YBX1P67809 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
YBX1P67809 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
YBX1P67809 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
YBX1P67809 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
YBX1P67809 MUC2-202ENST00000613187 4845 ntBASIC4.61□□□□□ -1.67
YBX1P67809 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
YBX1P67809 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 ASNSP1-201ENST00000518311 1939 ntBASIC4.6□□□□□ -1.67
YBX1P67809 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 ZNF33CP-201ENST00000432492 2030 ntBASIC4.6□□□□□ -1.67
YBX1P67809 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 DHX9P1-201ENST00000436565 3076 ntBASIC4.6□□□□□ -1.67
YBX1P67809 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
YBX1P67809 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.6□□□□□ -1.67
YBX1P67809 Y_RNA.80-201ENST00000362996 102 ntBASIC4.6□□□□□ -1.67
YBX1P67809 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
YBX1P67809 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
YBX1P67809 Y_RNA.389-201ENST00000383924 113 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms