Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 AL451007.1-201ENST00000595491 289 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AC245884.10-201ENST00000597355 337 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AL596327.1-201ENST00000603629 213 ntBASIC3.1□□□□□ -1.91
SRP54P61011 PRELID3BP8-201ENST00000604148 295 ntBASIC3.1□□□□□ -1.91
SRP54P61011 HSPE1P7-201ENST00000604681 321 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AL592221.1-201ENST00000605266 382 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AC112220.3-201ENST00000605502 502 ntBASIC3.1□□□□□ -1.91
SRP54P61011 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 AC024933.1-201ENST00000608472 348 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AC004067.1-201ENST00000608733 700 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AC100793.4-201ENST00000613683 429 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 AC027309.3-201ENST00000623419 351 ntBASIC3.1□□□□□ -1.91
SRP54P61011 AL159972.1-201ENST00000625150 448 ntBASIC3.1□□□□□ -1.91
SRP54P61011 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 MIR622-201ENST00000638396 96 ntBASIC3.1□□□□□ -1.91
SRP54P61011 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
SRP54P61011 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP54P61011 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRP54P61011 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRP54P61011 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.09□□□□□ -1.91
SRP54P61011 RNU6-1078P-201ENST00000364522 103 ntBASIC3.09□□□□□ -1.91
SRP54P61011 SNORD15B-201ENST00000384714 146 ntBASIC3.09□□□□□ -1.91
SRP54P61011 RNU6-584P-201ENST00000410350 95 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AL590383.1-201ENST00000428602 75 ntBASIC3.09□□□□□ -1.91
SRP54P61011 OR4K11P-201ENST00000431829 904 ntBASIC3.09□□□□□ -1.91
SRP54P61011 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.09□□□□□ -1.91
SRP54P61011 AC011825.1-201ENST00000484967 388 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.09□□□□□ -1.91
SRP54P61011 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.09□□□□□ -1.91
SRP54P61011 AC239860.2-201ENST00000525886 270 ntBASIC3.09□□□□□ -1.91
SRP54P61011 PSMA2P1-201ENST00000526365 646 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AP003497.1-201ENST00000528472 562 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.09□□□□□ -1.91
SRP54P61011 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
SRP54P61011 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.09□□□□□ -1.91
SRP54P61011 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.09□□□□□ -1.91
SRP54P61011 AC022960.3-201ENST00000619794 441 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AC008443.7-201ENST00000622195 246 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AP003122.6-201ENST00000623831 495 ntBASIC3.09□□□□□ -1.91
SRP54P61011 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
SRP54P61011 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRP54P61011 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SRP54P61011 AP000526.1-201ENST00000603308 1388 ntBASIC3.09□□□□□ -1.92
SRP54P61011 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SRP54P61011 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
SRP54P61011 TPTE2P4-201ENST00000258589 1605 ntBASIC3.08□□□□□ -1.92
SRP54P61011 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
SRP54P61011 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRP54P61011 GABRG2-229ENST00000641017 3628 ntBASIC3.08□□□□□ -1.92
SRP54P61011 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRP54P61011 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
SRP54P61011 RNU6-744P-201ENST00000365557 107 ntBASIC3.08□□□□□ -1.92
SRP54P61011 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SRP54P61011 RNU6-1316P-201ENST00000384242 108 ntBASIC3.08□□□□□ -1.92
SRP54P61011 MIR634-201ENST00000385208 97 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AL356421.1-201ENST00000403255 413 ntBASIC3.08□□□□□ -1.92
SRP54P61011 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
SRP54P61011 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.08□□□□□ -1.92
SRP54P61011 BMS1P22-201ENST00000414726 313 ntBASIC3.08□□□□□ -1.92
SRP54P61011 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.08□□□□□ -1.92
SRP54P61011 BX119904.4-201ENST00000424402 301 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC108734.1-201ENST00000439549 399 ntBASIC3.08□□□□□ -1.92
SRP54P61011 MTND3P1-201ENST00000441336 220 ntBASIC3.08□□□□□ -1.92
SRP54P61011 EEF1E1P1-201ENST00000446998 430 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP54P61011 PAXBP1P1-201ENST00000449315 447 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.08□□□□□ -1.92
SRP54P61011 AC104472.2-201ENST00000469035 601 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC068724.1-201ENST00000487100 792 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC104090.1-201ENST00000506341 1171 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC118282.1-201ENST00000506408 765 ntBASIC3.08□□□□□ -1.92
SRP54P61011 ARL4AP2-201ENST00000507378 601 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC006445.2-201ENST00000510061 472 ntBASIC3.08□□□□□ -1.92
SRP54P61011 RNU6-798P-201ENST00000516912 103 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.08□□□□□ -1.92
SRP54P61011 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SRP54P61011 AC022080.3-201ENST00000544433 482 ntBASIC3.08□□□□□ -1.92
SRP54P61011 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP54P61011 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP54P61011 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.08□□□□□ -1.92
SRP54P61011 AL049838.1-201ENST00000563647 981 ntBASIC3.08□□□□□ -1.92
SRP54P61011 MIR3609-201ENST00000582661 80 ntBASIC3.08□□□□□ -1.92
SRP54P61011 VN1R82P-201ENST00000601481 356 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC011458.1-201ENST00000604034 617 ntBASIC3.08□□□□□ -1.92
SRP54P61011 AC106791.2-201ENST00000604680 391 ntBASIC3.08□□□□□ -1.92
SRP54P61011 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SRP54P61011 AC233263.6-201ENST00000631132 1963 ntBASIC3.08□□□□□ -1.92
SRP54P61011 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SRP54P61011 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SRP54P61011 RNU5E-8P-201ENST00000363502 116 ntBASIC3.07□□□□□ -1.92
SRP54P61011 SNORD56.3-201ENST00000363507 71 ntBASIC3.07□□□□□ -1.92
SRP54P61011 U3.11-201ENST00000364476 212 ntBASIC3.07□□□□□ -1.92
SRP54P61011 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.07□□□□□ -1.92
SRP54P61011 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms