Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AP000857.1-201ENST00000532151 543 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN20P56880 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN20P56880 AL391156.1-201ENST00000554965 554 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN20P56880 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 MIR3913-1-201ENST00000577744 102 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN20P56880 KC877982.1-201ENST00000602313 470 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC073648.5-201ENST00000603502 305 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC098614.4-201ENST00000607601 462 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN20P56880 AC091834.1-201ENST00000614543 472 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC072046.2-201ENST00000618366 268 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 CR392039.5-201ENST00000623201 510 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 AC110994.2-201ENST00000635481 492 ntBASIC3.39□□□□□ -1.87
CLDN20P56880 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN20P56880 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN20P56880 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN20P56880 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN20P56880 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN20P56880 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN20P56880 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN20P56880 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 RNU6-432P-201ENST00000384196 109 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 Y_RNA.582-201ENST00000391023 95 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 RPL23AP32-201ENST00000395315 459 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 RPL7P60-201ENST00000397636 735 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 RNU4-65P-201ENST00000410473 140 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN20P56880 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 AC018644.1-201ENST00000429934 551 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 TXNP1-201ENST00000441872 371 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 MTND1P12-201ENST00000455231 147 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 AC011825.1-201ENST00000484967 388 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 TRBV12-2-201ENST00000489763 344 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC135721.1-201ENST00000497954 479 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC020893.1-201ENST00000502452 580 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC138853.1-201ENST00000503549 823 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC114967.1-201ENST00000504890 259 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 RNU6-720P-201ENST00000516363 108 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 RNU6-430P-201ENST00000517078 107 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 MTCO2P4-201ENST00000517968 247 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 DEFB108D-201ENST00000527787 222 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN20P56880 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 AL133153.1-201ENST00000557756 303 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN20P56880 AC068790.6-201ENST00000602558 258 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AL022099.1-201ENST00000604551 712 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN20P56880 AL590282.1-201ENST00000610379 1136 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC245517.5-201ENST00000611529 162 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC013562.2-201ENST00000611632 603 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC093838.1-201ENST00000613014 469 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC099842.1-201ENST00000619919 596 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 AC034229.5-201ENST00000624258 185 ntBASIC3.38□□□□□ -1.87
CLDN20P56880 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN20P56880 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN20P56880 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN20P56880 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CLDN20P56880 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN20P56880 MTND5P29-201ENST00000458676 1807 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CLDN20P56880 AP001486.2-201ENST00000561652 5113 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 RNU6-223P-201ENST00000362830 107 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 RNY4P16-201ENST00000364768 94 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 RNA5SP189-201ENST00000364920 115 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 SNORA62.3-201ENST00000365110 153 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 RNU5A-6P-201ENST00000384136 116 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 MIR607-201ENST00000385241 96 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 RN7SKP27-201ENST00000410684 333 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN20P56880 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 MTCO1P39-201ENST00000426148 480 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN20P56880 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN20P56880 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN20P56880 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
CLDN20P56880 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms