Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.1□□□□□ -2.07
CMC4P56277 AL451074.5-201ENST00000415894 435 ntBASIC2.1□□□□□ -2.07
CMC4P56277 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 AL590383.1-201ENST00000428602 75 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.1□□□□□ -2.07
CMC4P56277 AC009237.8-201ENST00000445492 379 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 ZNF886P-201ENST00000450781 723 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AC234775.1-201ENST00000454247 670 ntBASIC2.1□□□□□ -2.07
CMC4P56277 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.1□□□□□ -2.07
CMC4P56277 USP9YP10-201ENST00000454868 628 ntBASIC2.1□□□□□ -2.07
CMC4P56277 MTATP6P14-201ENST00000455189 673 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 AL031183.1-201ENST00000457667 207 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.1□□□□□ -2.07
CMC4P56277 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.1□□□□□ -2.07
CMC4P56277 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 AC097462.2-201ENST00000504623 481 ntBASIC2.1□□□□□ -2.07
CMC4P56277 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 AC079395.1-201ENST00000510981 262 ntBASIC2.1□□□□□ -2.07
CMC4P56277 RNU6-1282P-201ENST00000516735 96 ntBASIC2.1□□□□□ -2.07
CMC4P56277 RNA5SP380-201ENST00000517190 98 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AP000867.2-201ENST00000532468 320 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.1□□□□□ -2.07
CMC4P56277 AL132857.1-201ENST00000555180 708 ntBASIC2.1□□□□□ -2.07
CMC4P56277 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.1□□□□□ -2.07
CMC4P56277 CYCSP2-201ENST00000558168 301 ntBASIC2.1□□□□□ -2.07
CMC4P56277 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.1□□□□□ -2.07
CMC4P56277 AC090695.1-201ENST00000561269 1222 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CMC4P56277 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.1□□□□□ -2.07
CMC4P56277 MTCO3P24-201ENST00000572729 782 ntBASIC2.1□□□□□ -2.07
CMC4P56277 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.1□□□□□ -2.07
CMC4P56277 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.1□□□□□ -2.07
CMC4P56277 AC079089.3-201ENST00000603094 673 ntBASIC2.1□□□□□ -2.07
CMC4P56277 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.1□□□□□ -2.07
CMC4P56277 AC231657.1-201ENST00000624313 397 ntBASIC2.1□□□□□ -2.07
CMC4P56277 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.1□□□□□ -2.07
CMC4P56277 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.1□□□□□ -2.07
CMC4P56277 AC012321.1-201ENST00000561622 1588 ntBASIC2.1□□□□□ -2.07
CMC4P56277 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CMC4P56277 AC093831.2-201ENST00000624393 3427 ntBASIC2.1□□□□□ -2.07
CMC4P56277 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.1□□□□□ -2.07
CMC4P56277 AP003122.5-201ENST00000527668 3766 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CMC4P56277 AC008669.1-201ENST00000565823 2178 ntBASIC2.09□□□□□ -2.07
CMC4P56277 API5P2-201ENST00000397055 1498 ntBASIC2.09□□□□□ -2.07
CMC4P56277 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.09□□□□□ -2.07
CMC4P56277 MTCO1P9-201ENST00000505577 1534 ntBASIC2.09□□□□□ -2.07
CMC4P56277 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.09□□□□□ -2.07
CMC4P56277 NACA3P-201ENST00000359690 648 ntBASIC2.09□□□□□ -2.07
CMC4P56277 RNU5A-1-201ENST00000362698 116 ntBASIC2.09□□□□□ -2.07
CMC4P56277 Y_RNA.311-201ENST00000365068 96 ntBASIC2.09□□□□□ -2.07
CMC4P56277 Y_RNA.548-201ENST00000384656 105 ntBASIC2.09□□□□□ -2.07
CMC4P56277 MIR128-1-201ENST00000384921 82 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AL355143.1-201ENST00000407101 841 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AL356320.2-201ENST00000417263 507 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AL953862.1-201ENST00000423016 168 ntBASIC2.09□□□□□ -2.07
CMC4P56277 HMGN2P30-201ENST00000423237 256 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.09□□□□□ -2.07
CMC4P56277 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.09□□□□□ -2.07
CMC4P56277 AC107083.1-201ENST00000439643 279 ntBASIC2.09□□□□□ -2.07
CMC4P56277 MTND5P14-201ENST00000441481 1267 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AL109741.2-201ENST00000455561 343 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC104563.1-201ENST00000476147 376 ntBASIC2.09□□□□□ -2.07
CMC4P56277 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.09□□□□□ -2.07
CMC4P56277 DSTNP2-201ENST00000504533 515 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.09□□□□□ -2.07
CMC4P56277 AC109445.1-201ENST00000512356 383 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC026801.2-201ENST00000515352 425 ntBASIC2.09□□□□□ -2.07
CMC4P56277 RNY4P37-201ENST00000516225 96 ntBASIC2.09□□□□□ -2.07
CMC4P56277 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.09□□□□□ -2.07
CMC4P56277 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.09□□□□□ -2.07
CMC4P56277 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.09□□□□□ -2.07
CMC4P56277 AC239860.2-201ENST00000525886 270 ntBASIC2.09□□□□□ -2.07
CMC4P56277 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.09□□□□□ -2.07
CMC4P56277 NBEAP1-201ENST00000554452 979 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC138761.3-201ENST00000579993 334 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.09□□□□□ -2.07
CMC4P56277 BNIP3P27-201ENST00000599991 412 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC013553.2-201ENST00000604244 589 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC004832.5-201ENST00000608677 401 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC006213.4-201ENST00000616184 634 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AL137790.1-201ENST00000634283 177 ntBASIC2.09□□□□□ -2.07
CMC4P56277 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.09□□□□□ -2.07
CMC4P56277 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CMC4P56277 MTND4P9-201ENST00000507819 1346 ntBASIC2.09□□□□□ -2.08
CMC4P56277 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
CMC4P56277 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CMC4P56277 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
CMC4P56277 AC080100.1-201ENST00000624239 5356 ntBASIC2.08□□□□□ -2.08
CMC4P56277 AC092593.1-201ENST00000515413 1815 ntBASIC2.08□□□□□ -2.08
CMC4P56277 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.08□□□□□ -2.08
CMC4P56277 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.08□□□□□ -2.08
CMC4P56277 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CMC4P56277 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CMC4P56277 MIR514A1-201ENST00000385133 98 ntBASIC2.08□□□□□ -2.08
CMC4P56277 RPL23AP29-201ENST00000397284 453 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms