Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RNU6-297P-201ENST00000384636 107 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 MIR554-201ENST00000384874 96 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 CCNG1P1-201ENST00000406783 885 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 FCF1P10-201ENST00000407590 479 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 U3.42-201ENST00000408746 214 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 RN7SKP202-201ENST00000410439 330 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 RN7SKP159-201ENST00000410657 292 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H2P55055 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H2P55055 UBE2D3P2-201ENST00000424409 445 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC017083.1-201ENST00000428093 483 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.73□□□□□ -1.81
NR1H2P55055 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H2P55055 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H2P55055 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H2P55055 RPS29P31-201ENST00000446147 164 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 RPL23AP81-201ENST00000455252 467 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC099563.1-201ENST00000456086 418 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.73□□□□□ -1.81
NR1H2P55055 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H2P55055 AC008481.1-201ENST00000463278 396 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC084357.1-201ENST00000473404 255 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.73□□□□□ -1.81
NR1H2P55055 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H2P55055 MIR4474-201ENST00000579189 78 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 MTND1P15-201ENST00000579262 949 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC009977.1-201ENST00000586015 570 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC087683.1-201ENST00000591187 441 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H2P55055 AL355472.4-201ENST00000610233 626 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC122108.2-201ENST00000611946 526 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 SDR42E1P2-201ENST00000614861 481 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 AC010133.1-201ENST00000615809 842 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H2P55055 AC034229.5-201ENST00000624258 185 ntBASIC3.73□□□□□ -1.81
NR1H2P55055 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H2P55055 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H2P55055 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NR1H2P55055 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H2P55055 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NR1H2P55055 RNU6-1197P-201ENST00000391183 107 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 PTMAP5-201ENST00000393073 333 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL583835.1-201ENST00000399570 407 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 HLFP1-201ENST00000402375 499 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL391417.1-201ENST00000404100 426 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 RPL21P24-201ENST00000413752 448 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H2P55055 BX842559.1-201ENST00000419615 532 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC245054.1-201ENST00000420944 258 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL157831.1-201ENST00000426134 473 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H2P55055 AL117339.2-201ENST00000430475 180 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 USP9YP14-201ENST00000430663 563 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H2P55055 NDUFB4P6-201ENST00000436819 366 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 RPS24P1-201ENST00000438550 371 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC083863.1-201ENST00000438811 231 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL031667.1-201ENST00000440222 725 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC093156.1-201ENST00000440382 670 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H2P55055 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H2P55055 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H2P55055 RNU7-170P-201ENST00000459303 61 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 snoU109.1-201ENST00000459339 135 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 RPL31P60-201ENST00000478450 367 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 RPS29P19-201ENST00000479709 171 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 ACTR3P3-201ENST00000480448 893 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 LARP1BP2-201ENST00000486594 519 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL132838.2-201ENST00000492041 314 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 RPL30P5-201ENST00000494923 336 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC026784.1-201ENST00000507986 352 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 NDUFB4P2-201ENST00000509515 391 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 FTH1P21-201ENST00000512179 511 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.72□□□□□ -1.81
NR1H2P55055 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H2P55055 AC093012.1-202ENST00000549403 582 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC124947.2-202ENST00000552735 133 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL157394.1-201ENST00000562983 1224 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.72□□□□□ -1.81
NR1H2P55055 AC022968.1-201ENST00000567372 442 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 MIR3146-201ENST00000580367 79 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 MIR4425-201ENST00000580572 84 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H2P55055 AL606834.2-201ENST00000602954 668 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC079089.3-201ENST00000603094 673 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL161729.3-201ENST00000603533 673 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 RNU6-87P-201ENST00000607561 108 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC006566.1-201ENST00000608943 513 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC131902.3-201ENST00000611767 581 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC068831.7-201ENST00000616954 363 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AL591424.2-201ENST00000617023 128 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 SNHG22-203ENST00000617833 660 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H2P55055 TPTE2P4-201ENST00000258589 1605 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 AC091152.2-201ENST00000591628 2569 ntBASIC3.72□□□□□ -1.81
NR1H2P55055 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
NR1H2P55055 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
NR1H2P55055 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
NR1H2P55055 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NR1H2P55055 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms