Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.4□□□□□ -1.71
ATXN1P54253 RPS29P19-201ENST00000479709 171 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.4□□□□□ -1.71
ATXN1P54253 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.4□□□□□ -1.71
ATXN1P54253 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.4□□□□□ -1.71
ATXN1P54253 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AC078814.3-201ENST00000553036 491 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
ATXN1P54253 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.4□□□□□ -1.71
ATXN1P54253 AC006960.3-201ENST00000561845 705 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.4□□□□□ -1.71
ATXN1P54253 MIR3171-201ENST00000584270 74 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AL132765.2-201ENST00000610812 351 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AC064801.1-201ENST00000612025 407 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AC091304.9-201ENST00000612091 226 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.4□□□□□ -1.71
ATXN1P54253 AC009318.4-201ENST00000620496 486 ntBASIC4.4□□□□□ -1.71
ATXN1P54253 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
ATXN1P54253 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATXN1P54253 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.39□□□□□ -1.71
ATXN1P54253 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.39□□□□□ -1.71
ATXN1P54253 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ATXN1P54253 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.39□□□□□ -1.71
ATXN1P54253 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.39□□□□□ -1.71
ATXN1P54253 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ATXN1P54253 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 Y_RNA.279-201ENST00000364763 95 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 RNU4-70P-201ENST00000384579 139 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 SNORA19-201ENST00000384737 128 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 RNA5SP56-201ENST00000410277 118 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.39□□□□□ -1.71
ATXN1P54253 AC244098.2-201ENST00000422068 99 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AL445669.1-201ENST00000426743 755 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 BX890604.2-201ENST00000427883 474 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 CBX3P6-201ENST00000430257 527 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 TAAR7P-201ENST00000436141 242 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.39□□□□□ -1.71
ATXN1P54253 AC099563.1-201ENST00000456086 418 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC022364.2-201ENST00000457963 554 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 PABPC1P3-201ENST00000469174 459 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 RPS3AP17-201ENST00000472594 777 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.39□□□□□ -1.71
ATXN1P54253 MTND1P3-201ENST00000484956 952 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC110768.1-201ENST00000509222 400 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.39□□□□□ -1.71
ATXN1P54253 AC022483.1-201ENST00000514020 567 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC010342.1-201ENST00000514047 877 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.39□□□□□ -1.71
ATXN1P54253 RN7SKP13-201ENST00000515933 244 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.39□□□□□ -1.71
ATXN1P54253 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.39□□□□□ -1.71
ATXN1P54253 VN1R79P-201ENST00000593540 513 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.39□□□□□ -1.71
ATXN1P54253 AC019176.2-201ENST00000611579 315 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 FAM27D1-201ENST00000612308 341 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 MIR7154-201ENST00000620673 73 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 CYP3A51P-201ENST00000633513 256 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ATXN1P54253 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.39□□□□□ -1.71
ATXN1P54253 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
ATXN1P54253 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.39□□□□□ -1.71
ATXN1P54253 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATXN1P54253 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATXN1P54253 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 AC105074.1-201ENST00000623380 3095 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 MTND5P33-201ENST00000571250 1450 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC073346.2-201ENST00000624724 2058 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ATXN1P54253 RNU6-263P-201ENST00000363811 107 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 RNU6-534P-201ENST00000364877 106 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 SNORD82-201ENST00000365530 70 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.38□□□□□ -1.71
ATXN1P54253 RNU6-1026P-201ENST00000384465 108 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 RNU6-837P-201ENST00000391056 108 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.38□□□□□ -1.71
ATXN1P54253 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.38□□□□□ -1.71
ATXN1P54253 RNU4-78P-201ENST00000410940 126 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.38□□□□□ -1.71
ATXN1P54253 MTCYBP45-201ENST00000435243 565 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 HLA-N-201ENST00000437516 135 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 PGBD4P3-201ENST00000440731 581 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.38□□□□□ -1.71
ATXN1P54253 AC233279.1-201ENST00000455300 423 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 AC104563.1-201ENST00000476147 376 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 RPS27AP13-201ENST00000498403 237 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC093767.1-201ENST00000504523 156 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC010587.1-201ENST00000505809 469 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.38□□□□□ -1.71
ATXN1P54253 FGF7P4-201ENST00000509595 295 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 GMPSP1-201ENST00000514075 579 ntBASIC4.38□□□□□ -1.71
ATXN1P54253 RNU6-430P-201ENST00000517078 107 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms