Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RPS12P24-201ENST00000412619 387 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.47□□□□□ -2.17
BRCA2P51587 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 MIR4506-201ENST00000584693 77 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.47□□□□□ -2.17
BRCA2P51587 TEX21P-201ENST00000447107 1476 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
BRCA2P51587 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 Y_RNA.274-201ENST00000364714 101 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 RNU6-198P-201ENST00000384258 104 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
BRCA2P51587 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.47□□□□□ -2.17
BRCA2P51587 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
BRCA2P51587 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.47□□□□□ -2.17
BRCA2P51587 AP003033.1-201ENST00000527244 415 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.47□□□□□ -2.17
BRCA2P51587 SNORA26.7-201ENST00000391288 122 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 VN1R96P-201ENST00000446052 858 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 AC092902.1-201ENST00000486999 259 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.47□□□□□ -2.17
BRCA2P51587 HMGN2P47-201ENST00000559378 272 ntBASIC1.47□□□□□ -2.17
BRCA2P51587 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.47□□□□□ -2.17
BRCA2P51587 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
BRCA2P51587 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
BRCA2P51587 NEFMP1-201ENST00000443423 1006 ntBASIC1.46□□□□□ -2.18
BRCA2P51587 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
BRCA2P51587 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.46□□□□□ -2.18
BRCA2P51587 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
BRCA2P51587 MTCYBP45-201ENST00000435243 565 ntBASIC1.46□□□□□ -2.18
BRCA2P51587 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.46□□□□□ -2.18
BRCA2P51587 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.46□□□□□ -2.18
BRCA2P51587 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
BRCA2P51587 RFPL1S-203ENST00000539579 330 ntBASIC1.46□□□□□ -2.18
BRCA2P51587 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.46□□□□□ -2.18
BRCA2P51587 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
BRCA2P51587 MIR3074-201ENST00000384885 81 ntBASIC1.46□□□□□ -2.18
BRCA2P51587 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.46□□□□□ -2.18
BRCA2P51587 AC139103.1-201ENST00000534696 1030 ntBASIC1.46□□□□□ -2.18
BRCA2P51587 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.46□□□□□ -2.18
BRCA2P51587 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.45□□□□□ -2.18
BRCA2P51587 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.45□□□□□ -2.18
BRCA2P51587 AC090525.3-201ENST00000605601 189 ntBASIC1.45□□□□□ -2.18
BRCA2P51587 AL138955.1-201ENST00000622881 1040 ntBASIC1.45□□□□□ -2.18
BRCA2P51587 RNU2-25P-201ENST00000411041 191 ntBASIC1.45□□□□□ -2.18
BRCA2P51587 RNU6-113P-201ENST00000516653 101 ntBASIC1.45□□□□□ -2.18
BRCA2P51587 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.45□□□□□ -2.18
BRCA2P51587 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.44□□□□□ -2.18
BRCA2P51587 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA2P51587 MTND1P23-201ENST00000416931 372 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 SNORD121B-201ENST00000458838 81 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 AC090071.1-201ENST00000507713 644 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 HSPE1P3-201ENST00000559254 309 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 MIR3973-201ENST00000579824 107 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 AC104307.1-201ENST00000616142 196 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 MTND5P7-201ENST00000413558 1798 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA2P51587 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.44□□□□□ -2.18
BRCA2P51587 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.44□□□□□ -2.18
BRCA2P51587 AL121917.1-203ENST00000605534 577 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.44□□□□□ -2.18
BRCA2P51587 AP000873.1-201ENST00000463987 400 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA2P51587 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA2P51587 DUXAP5-201ENST00000529668 529 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 AC111188.2-201ENST00000529697 1387 ntBASIC1.44□□□□□ -2.18
BRCA2P51587 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.43□□□□□ -2.18
BRCA2P51587 HMGN1P14-201ENST00000412459 517 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.43□□□□□ -2.18
BRCA2P51587 ARL5AP3-201ENST00000439327 386 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.43□□□□□ -2.18
BRCA2P51587 RNA5SP384-201ENST00000516615 116 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
BRCA2P51587 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
BRCA2P51587 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
BRCA2P51587 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 AC138649.5-201ENST00000637456 137 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 RNU1-78P-201ENST00000391248 165 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.43□□□□□ -2.18
BRCA2P51587 AC116447.1-201ENST00000613153 453 ntBASIC1.43□□□□□ -2.18
BRCA2P51587 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
BRCA2P51587 WARS2P1-201ENST00000429678 537 ntBASIC1.42□□□□□ -2.18
BRCA2P51587 RPL31P35-201ENST00000431058 377 ntBASIC1.42□□□□□ -2.18
BRCA2P51587 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
BRCA2P51587 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.42□□□□□ -2.18
BRCA2P51587 AC007256.1-201ENST00000392253 2765 ntBASIC1.42□□□□□ -2.18
BRCA2P51587 AC011477.1-204ENST00000623416 1325 ntBASIC1.42□□□□□ -2.18
BRCA2P51587 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.42□□□□□ -2.18
BRCA2P51587 SNRPFP3-201ENST00000457792 225 ntBASIC1.42□□□□□ -2.18
BRCA2P51587 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
BRCA2P51587 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
BRCA2P51587 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
BRCA2P51587 KATNBL1P4-201ENST00000503545 918 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.41□□□□□ -2.18
BRCA2P51587 MIR4448-201ENST00000584360 86 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 SEPT7P9-203ENST00000604116 343 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.41□□□□□ -2.18
BRCA2P51587 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.41□□□□□ -2.18
BRCA2P51587 RPS23P4-201ENST00000487908 423 ntBASIC1.41□□□□□ -2.18
BRCA2P51587 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms