Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CXCL12P48061 AP005901.5-201ENST00000545779 1796 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 NUP58P1-201ENST00000502546 1738 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 AC104454.1-201ENST00000421341 1401 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL12P48061 U3.29-201ENST00000391296 212 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL12P48061 AC080125.1-201ENST00000414888 684 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 RAD23BP2-201ENST00000416003 1207 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL12P48061 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL12P48061 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 GTF2IP7-202ENST00000436677 309 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL12P48061 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 RPL36AP33-201ENST00000450395 310 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL12P48061 MTCO3P35-201ENST00000485582 781 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AC104986.1-201ENST00000517978 436 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL12P48061 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 AP001189.2-201ENST00000527320 189 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 OR4P1P-201ENST00000530808 1136 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.46□□□□□ -2.02
CXCL12P48061 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL12P48061 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.46□□□□□ -2.02
CXCL12P48061 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 AC046143.2-201ENST00000609789 160 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AL590282.1-201ENST00000610379 1136 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AL158163.2-201ENST00000619110 700 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AC006963.1-201ENST00000624003 1052 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 CR381653.2-201ENST00000624041 768 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 AC013437.2-201ENST00000639587 677 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.46□□□□□ -2.02
CXCL12P48061 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL12P48061 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CXCL12P48061 ZNF72P-201ENST00000425869 1908 ntBASIC2.46□□□□□ -2.02
CXCL12P48061 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL12P48061 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CXCL12P48061 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL12P48061 RNU6-1181P-201ENST00000384191 106 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 BTF3P7-201ENST00000407097 488 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AL161449.1-201ENST00000414531 1199 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AC092447.6-201ENST00000414578 210 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 AC012497.1-201ENST00000429392 575 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL12P48061 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL12P48061 VN1R10P-201ENST00000447106 875 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CXCL12P48061 MTATP6P14-201ENST00000455189 673 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AC092757.1-201ENST00000467293 467 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AC079203.1-201ENST00000487972 404 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL12P48061 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 RNU1-61P-201ENST00000516107 151 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 RNU6-991P-201ENST00000516168 107 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 RNU6-56P-201ENST00000516986 93 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 RNU6-548P-201ENST00000517083 115 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 RNU6-1261P-201ENST00000517194 104 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AC091163.3-201ENST00000518269 1144 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL12P48061 AC126177.3-201ENST00000551839 688 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL12P48061 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.45□□□□□ -2.02
CXCL12P48061 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 AC055876.1-202ENST00000567053 138 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.45□□□□□ -2.02
CXCL12P48061 AC128687.1-201ENST00000605304 619 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AL158050.2-201ENST00000605336 568 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AL627309.6-201ENST00000606857 840 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AL109620.1-201ENST00000618738 1197 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AC123767.1-202ENST00000620407 817 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 MIR6873-201ENST00000622788 63 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL12P48061 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.45□□□□□ -2.02
CXCL12P48061 MTCO1P23-201ENST00000415223 1526 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.45□□□□□ -2.02
CXCL12P48061 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.45□□□□□ -2.02
CXCL12P48061 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CXCL12P48061 AC093831.2-201ENST00000624393 3427 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 MAPK10-322ENST00000641485 4530 ntBASIC2.45□□□□□ -2.02
CXCL12P48061 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.44□□□□□ -2.02
CXCL12P48061 MTCO1P9-201ENST00000505577 1534 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL12P48061 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL12P48061 RNA5SP456-201ENST00000364002 114 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 snoZ40.1-201ENST00000364540 72 ntBASIC2.44□□□□□ -2.02
CXCL12P48061 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms