Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 RPL36AP33-201ENST00000450395 310 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC006539.3-201ENST00000454258 129 ntBASIC3.59□□□□□ -1.83
HADHAP40939 RN7SL594P-201ENST00000470590 287 ntBASIC3.59□□□□□ -1.83
HADHAP40939 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.59□□□□□ -1.83
HADHAP40939 FCF1P3-201ENST00000496394 590 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC135721.1-201ENST00000497954 479 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC020893.1-201ENST00000502452 580 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.59□□□□□ -1.83
HADHAP40939 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 CDC42P4-201ENST00000510507 563 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC010265.1-201ENST00000513509 211 ntBASIC3.59□□□□□ -1.83
HADHAP40939 RNU6-201P-201ENST00000517100 61 ntBASIC3.59□□□□□ -1.83
HADHAP40939 MTND2P38-201ENST00000522536 667 ntBASIC3.59□□□□□ -1.83
HADHAP40939 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 AC007834.2-201ENST00000536310 343 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AL133271.1-201ENST00000538229 291 ntBASIC3.59□□□□□ -1.83
HADHAP40939 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.59□□□□□ -1.83
HADHAP40939 MTND3P12-201ENST00000559068 328 ntBASIC3.59□□□□□ -1.83
HADHAP40939 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 AC011260.1-201ENST00000578420 472 ntBASIC3.59□□□□□ -1.83
HADHAP40939 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.59□□□□□ -1.83
HADHAP40939 AC012360.2-201ENST00000609349 391 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC092192.1-201ENST00000633154 1018 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC093591.3-201ENST00000634516 308 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AL034408.1-202ENST00000636088 415 ntBASIC3.59□□□□□ -1.83
HADHAP40939 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.59□□□□□ -1.83
HADHAP40939 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.59□□□□□ -1.84
HADHAP40939 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HADHAP40939 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HADHAP40939 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
HADHAP40939 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.58□□□□□ -1.84
HADHAP40939 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HADHAP40939 SNORA23-201ENST00000365128 182 ntBASIC3.58□□□□□ -1.84
HADHAP40939 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HADHAP40939 SNORD116-8-201ENST00000384365 95 ntBASIC3.58□□□□□ -1.84
HADHAP40939 SNORA1.3-201ENST00000384676 136 ntBASIC3.58□□□□□ -1.84
HADHAP40939 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
HADHAP40939 FAT1P1-201ENST00000406588 507 ntBASIC3.58□□□□□ -1.84
HADHAP40939 RNU6-55P-201ENST00000411092 107 ntBASIC3.58□□□□□ -1.84
HADHAP40939 RNU6-954P-201ENST00000411355 107 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC018630.2-202ENST00000422992 927 ntBASIC3.58□□□□□ -1.84
HADHAP40939 TMEM167AP1-201ENST00000423409 219 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.58□□□□□ -1.84
HADHAP40939 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HADHAP40939 AL445567.1-201ENST00000439121 144 ntBASIC3.58□□□□□ -1.84
HADHAP40939 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.58□□□□□ -1.84
HADHAP40939 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.58□□□□□ -1.84
HADHAP40939 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HADHAP40939 SETP11-201ENST00000473027 690 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC084357.1-201ENST00000473404 255 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC109486.1-201ENST00000486833 374 ntBASIC3.58□□□□□ -1.84
HADHAP40939 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HADHAP40939 AC116347.2-201ENST00000514912 523 ntBASIC3.58□□□□□ -1.84
HADHAP40939 SCARNA15.2-201ENST00000516409 127 ntBASIC3.58□□□□□ -1.84
HADHAP40939 RNU6-759P-201ENST00000516740 103 ntBASIC3.58□□□□□ -1.84
HADHAP40939 RNU6-711P-201ENST00000517255 106 ntBASIC3.58□□□□□ -1.84
HADHAP40939 DUXAP2-201ENST00000519198 589 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AP000907.2-201ENST00000530827 353 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AP000857.1-201ENST00000532151 543 ntBASIC3.58□□□□□ -1.84
HADHAP40939 OSBPL9P5-201ENST00000542581 171 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.58□□□□□ -1.84
HADHAP40939 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.58□□□□□ -1.84
HADHAP40939 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.58□□□□□ -1.84
HADHAP40939 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.58□□□□□ -1.84
HADHAP40939 AC008088.1-201ENST00000580993 280 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.58□□□□□ -1.84
HADHAP40939 WISP1-OT1-201ENST00000602893 642 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC008962.1-201ENST00000605729 304 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC009570.1-201ENST00000609599 745 ntBASIC3.58□□□□□ -1.84
HADHAP40939 OR10AB1P-201ENST00000609613 938 ntBASIC3.58□□□□□ -1.84
HADHAP40939 MIR7851-201ENST00000610611 160 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC019176.2-201ENST00000611579 315 ntBASIC3.58□□□□□ -1.84
HADHAP40939 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HADHAP40939 TUG1_2.1-201ENST00000614234 87 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC022149.2-201ENST00000621061 203 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AC006111.3-201ENST00000622137 383 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AL079305.1-201ENST00000623159 3008 ntBASIC3.58□□□□□ -1.84
HADHAP40939 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HADHAP40939 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HADHAP40939 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HADHAP40939 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HADHAP40939 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.57□□□□□ -1.84
HADHAP40939 MIR19A-201ENST00000384878 82 ntBASIC3.57□□□□□ -1.84
HADHAP40939 MIR493-201ENST00000385254 89 ntBASIC3.57□□□□□ -1.84
HADHAP40939 SNORD115.1-201ENST00000391109 76 ntBASIC3.57□□□□□ -1.84
HADHAP40939 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.57□□□□□ -1.84
HADHAP40939 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
HADHAP40939 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HADHAP40939 AC008850.1-201ENST00000427546 362 ntBASIC3.57□□□□□ -1.84
HADHAP40939 BX890604.2-201ENST00000427883 474 ntBASIC3.57□□□□□ -1.84
HADHAP40939 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.57□□□□□ -1.84
HADHAP40939 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
HADHAP40939 ZNF114P1-201ENST00000453500 292 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.57□□□□□ -1.84
HADHAP40939 SNRPFP4-201ENST00000456366 242 ntBASIC3.57□□□□□ -1.84
HADHAP40939 AC108059.3-201ENST00000456388 214 ntBASIC3.57□□□□□ -1.84
HADHAP40939 snoU13.22-201ENST00000459428 104 ntBASIC3.57□□□□□ -1.84
HADHAP40939 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms