Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC3P40938 AC087897.1-201ENST00000550134 156 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC3P40938 HMGB1P14-201ENST00000557424 591 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AC023825.1-201ENST00000566704 1030 ntBASIC2.51□□□□□ -2.01
RFC3P40938 MIR4637-201ENST00000582405 84 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.51□□□□□ -2.01
RFC3P40938 U73023.1-201ENST00000603134 700 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AC099785.1-201ENST00000605697 437 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AL020991.1-201ENST00000612314 373 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AC005332.6-201ENST00000613178 446 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AC099654.7-201ENST00000635788 2127 ntBASIC2.51□□□□□ -2.01
RFC3P40938 AL035425.3-201ENST00000564206 4996 ntBASIC2.51□□□□□ -2.01
RFC3P40938 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RFC3P40938 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
RFC3P40938 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.51□□□□□ -2.01
RFC3P40938 TPTE2P4-201ENST00000258589 1605 ntBASIC2.5□□□□□ -2.01
RFC3P40938 FRG1BP-201ENST00000278882 761 ntBASIC2.5□□□□□ -2.01
RFC3P40938 SNRPEP3-201ENST00000338402 276 ntBASIC2.5□□□□□ -2.01
RFC3P40938 SNORA25.6-201ENST00000364121 118 ntBASIC2.5□□□□□ -2.01
RFC3P40938 MIR34A-201ENST00000385130 110 ntBASIC2.5□□□□□ -2.01
RFC3P40938 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RFC3P40938 RNA5SP80-201ENST00000410475 111 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC019097.1-201ENST00000424783 735 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.5□□□□□ -2.01
RFC3P40938 AC092573.2-201ENST00000434546 243 ntBASIC2.5□□□□□ -2.01
RFC3P40938 LSM1P1-201ENST00000438629 273 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC092427.1-201ENST00000439177 601 ntBASIC2.5□□□□□ -2.01
RFC3P40938 PTGES3P1-201ENST00000439531 483 ntBASIC2.5□□□□□ -2.01
RFC3P40938 RPL26P6-201ENST00000440913 438 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC079776.3-201ENST00000450665 370 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC023424.2-201ENST00000493479 777 ntBASIC2.5□□□□□ -2.01
RFC3P40938 RAC1P5-201ENST00000512182 576 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.5□□□□□ -2.01
RFC3P40938 RNU6-798P-201ENST00000516912 103 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AP003066.2-201ENST00000529375 555 ntBASIC2.5□□□□□ -2.01
RFC3P40938 OR4R2P-201ENST00000530815 597 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC087894.1-201ENST00000538359 518 ntBASIC2.5□□□□□ -2.01
RFC3P40938 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.5□□□□□ -2.01
RFC3P40938 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.5□□□□□ -2.01
RFC3P40938 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.5□□□□□ -2.01
RFC3P40938 MTND4LP25-201ENST00000570218 163 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.5□□□□□ -2.01
RFC3P40938 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.5□□□□□ -2.01
RFC3P40938 AC079089.3-201ENST00000603094 673 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AL445435.1-201ENST00000604232 665 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC004853.1-201ENST00000604902 698 ntBASIC2.5□□□□□ -2.01
RFC3P40938 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.5□□□□□ -2.01
RFC3P40938 AC018926.1-201ENST00000616335 435 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.5□□□□□ -2.01
RFC3P40938 AP000943.4-201ENST00000622912 357 ntBASIC2.5□□□□□ -2.01
RFC3P40938 AC090772.4-201ENST00000623599 362 ntBASIC2.5□□□□□ -2.01
RFC3P40938 IGHVIII-44-202ENST00000636235 289 ntBASIC2.5□□□□□ -2.01
RFC3P40938 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RFC3P40938 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RFC3P40938 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.49□□□□□ -2.01
RFC3P40938 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RFC3P40938 RPL9P7-201ENST00000330965 580 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AL356057.3-201ENST00000402607 340 ntBASIC2.49□□□□□ -2.01
RFC3P40938 FO393413.1-201ENST00000402892 195 ntBASIC2.49□□□□□ -2.01
RFC3P40938 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFC3P40938 RPS3AP24-201ENST00000407896 734 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.49□□□□□ -2.01
RFC3P40938 MTATP6P27-201ENST00000416987 621 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AC013262.1-201ENST00000426710 252 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.49□□□□□ -2.01
RFC3P40938 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
RFC3P40938 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.49□□□□□ -2.01
RFC3P40938 RPS29P6-201ENST00000438196 145 ntBASIC2.49□□□□□ -2.01
RFC3P40938 MTCYBP42-201ENST00000444653 1130 ntBASIC2.49□□□□□ -2.01
RFC3P40938 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFC3P40938 AP000936.2-201ENST00000447151 681 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AC003982.1-202ENST00000469928 248 ntBASIC2.49□□□□□ -2.01
RFC3P40938 RPL31P50-201ENST00000471002 296 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.49□□□□□ -2.01
RFC3P40938 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFC3P40938 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
RFC3P40938 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.49□□□□□ -2.01
RFC3P40938 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.49□□□□□ -2.01
RFC3P40938 AC007954.1-201ENST00000554198 494 ntBASIC2.49□□□□□ -2.01
RFC3P40938 ACTR3BP3-201ENST00000565577 979 ntBASIC2.49□□□□□ -2.01
RFC3P40938 MIR5708-201ENST00000579723 85 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.49□□□□□ -2.01
RFC3P40938 MIR4298-201ENST00000584380 73 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.49□□□□□ -2.01
RFC3P40938 AC020895.1-201ENST00000595362 272 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AC025588.4-201ENST00000615802 908 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AL355493.4-201ENST00000618530 292 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AC120349.2-201ENST00000625002 298 ntBASIC2.49□□□□□ -2.01
RFC3P40938 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.49□□□□□ -2.01
RFC3P40938 CRYM-AS1-204ENST00000637983 556 ntBASIC2.49□□□□□ -2.01
RFC3P40938 MIR1322-201ENST00000638013 71 ntBASIC2.49□□□□□ -2.01
RFC3P40938 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RFC3P40938 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
RFC3P40938 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFC3P40938 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RFC3P40938 AC107982.1-201ENST00000507171 1300 ntBASIC2.48□□□□□ -2.01
RFC3P40938 AC010680.1-201ENST00000590024 3590 ntBASIC2.48□□□□□ -2.01
RFC3P40938 NACA3P-201ENST00000359690 648 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms