Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SUMO2P2-201ENST00000456482 255 ntBASIC2.71□□□□□ -1.98
RORAP35398 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.71□□□□□ -1.98
RORAP35398 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.71□□□□□ -1.98
RORAP35398 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
RORAP35398 AC096571.1-202ENST00000506634 735 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC113420.1-201ENST00000507903 571 ntBASIC2.71□□□□□ -1.98
RORAP35398 RPL23AP94-201ENST00000512518 302 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.71□□□□□ -1.98
RORAP35398 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.71□□□□□ -1.98
RORAP35398 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RORAP35398 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.71□□□□□ -1.98
RORAP35398 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.71□□□□□ -1.98
RORAP35398 CR383656.7-201ENST00000548164 174 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC079600.2-201ENST00000550076 130 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.71□□□□□ -1.98
RORAP35398 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.71□□□□□ -1.98
RORAP35398 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.71□□□□□ -1.98
RORAP35398 MIR4637-201ENST00000582405 84 ntBASIC2.71□□□□□ -1.98
RORAP35398 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.71□□□□□ -1.98
RORAP35398 AF129408.1-201ENST00000608767 431 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC004009.2-201ENST00000623016 728 ntBASIC2.71□□□□□ -1.98
RORAP35398 AC068880.5-201ENST00000624331 290 ntBASIC2.71□□□□□ -1.98
RORAP35398 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.71□□□□□ -1.98
RORAP35398 AC110079.1-202ENST00000635213 138 ntBASIC2.71□□□□□ -1.98
RORAP35398 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.71□□□□□ -1.98
RORAP35398 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RORAP35398 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RORAP35398 GABRG2-229ENST00000641017 3628 ntBASIC2.7□□□□□ -1.98
RORAP35398 VTRNA1-1-201ENST00000363120 99 ntBASIC2.7□□□□□ -1.98
RORAP35398 RNU5E-10P-201ENST00000363506 118 ntBASIC2.7□□□□□ -1.98
RORAP35398 MIR135A2-201ENST00000384854 100 ntBASIC2.7□□□□□ -1.98
RORAP35398 RNU6-882P-201ENST00000391025 103 ntBASIC2.7□□□□□ -1.98
RORAP35398 RNU2-25P-201ENST00000411041 191 ntBASIC2.7□□□□□ -1.98
RORAP35398 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.7□□□□□ -1.98
RORAP35398 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.7□□□□□ -1.98
RORAP35398 Z75741.2-201ENST00000417272 1167 ntBASIC2.7□□□□□ -1.98
RORAP35398 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.7□□□□□ -1.98
RORAP35398 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.7□□□□□ -1.98
RORAP35398 AL590233.1-201ENST00000430017 456 ntBASIC2.7□□□□□ -1.98
RORAP35398 NDUFB4P6-201ENST00000436819 366 ntBASIC2.7□□□□□ -1.98
RORAP35398 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.7□□□□□ -1.98
RORAP35398 AL353691.1-201ENST00000451332 387 ntBASIC2.7□□□□□ -1.98
RORAP35398 AC010099.1-201ENST00000455434 375 ntBASIC2.7□□□□□ -1.98
RORAP35398 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.7□□□□□ -1.98
RORAP35398 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.7□□□□□ -1.98
RORAP35398 SNORA70.16-201ENST00000516390 95 ntBASIC2.7□□□□□ -1.98
RORAP35398 COX6CP8-201ENST00000522620 226 ntBASIC2.7□□□□□ -1.98
RORAP35398 MTCO1P47-201ENST00000523889 1271 ntBASIC2.7□□□□□ -1.98
RORAP35398 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.7□□□□□ -1.98
RORAP35398 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.7□□□□□ -1.98
RORAP35398 HSPE1P3-201ENST00000559254 309 ntBASIC2.7□□□□□ -1.98
RORAP35398 MIR4319-201ENST00000577285 85 ntBASIC2.7□□□□□ -1.98
RORAP35398 AL031176.1-201ENST00000604554 466 ntBASIC2.7□□□□□ -1.98
RORAP35398 AC025588.4-201ENST00000615802 908 ntBASIC2.7□□□□□ -1.98
RORAP35398 AP003485.2-201ENST00000623636 610 ntBASIC2.7□□□□□ -1.98
RORAP35398 AC009039.2-201ENST00000624524 529 ntBASIC2.7□□□□□ -1.98
RORAP35398 ZNF519P1-201ENST00000449011 1626 ntBASIC2.7□□□□□ -1.98
RORAP35398 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.7□□□□□ -1.98
RORAP35398 CDR1-202ENST00000625883 1485 ntBASIC2.7□□□□□ -1.98
RORAP35398 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.7□□□□□ -1.98
RORAP35398 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
RORAP35398 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RORAP35398 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
RORAP35398 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
RORAP35398 Y_RNA.548-201ENST00000384656 105 ntBASIC2.69□□□□□ -1.98
RORAP35398 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.69□□□□□ -1.98
RORAP35398 MRPS36P1-201ENST00000421291 307 ntBASIC2.69□□□□□ -1.98
RORAP35398 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
RORAP35398 RPL7L1P10-201ENST00000427790 463 ntBASIC2.69□□□□□ -1.98
RORAP35398 MTCYBP45-201ENST00000435243 565 ntBASIC2.69□□□□□ -1.98
RORAP35398 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.69□□□□□ -1.98
RORAP35398 MTND2P20-201ENST00000440805 661 ntBASIC2.69□□□□□ -1.98
RORAP35398 AL121871.1-201ENST00000443413 436 ntBASIC2.69□□□□□ -1.98
RORAP35398 MTATP6P14-201ENST00000455189 673 ntBASIC2.69□□□□□ -1.98
RORAP35398 AC079203.1-201ENST00000487972 404 ntBASIC2.69□□□□□ -1.98
RORAP35398 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.69□□□□□ -1.98
RORAP35398 AIG1P1-201ENST00000503376 148 ntBASIC2.69□□□□□ -1.98
RORAP35398 MTCYBP17-201ENST00000503579 789 ntBASIC2.69□□□□□ -1.98
RORAP35398 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.69□□□□□ -1.98
RORAP35398 HMGB1P28-201ENST00000507778 552 ntBASIC2.69□□□□□ -1.98
RORAP35398 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.69□□□□□ -1.98
RORAP35398 AC010376.1-201ENST00000522101 334 ntBASIC2.69□□□□□ -1.98
RORAP35398 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RORAP35398 AC087276.1-201ENST00000529659 480 ntBASIC2.69□□□□□ -1.98
RORAP35398 SLC2A13P1-201ENST00000531560 322 ntBASIC2.69□□□□□ -1.98
RORAP35398 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.69□□□□□ -1.98
RORAP35398 YWHAZP1-201ENST00000556286 722 ntBASIC2.69□□□□□ -1.98
RORAP35398 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.69□□□□□ -1.98
RORAP35398 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.69□□□□□ -1.98
RORAP35398 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.69□□□□□ -1.98
RORAP35398 AC015688.2-201ENST00000584523 262 ntBASIC2.69□□□□□ -1.98
RORAP35398 VN1R90P-201ENST00000595717 726 ntBASIC2.69□□□□□ -1.98
RORAP35398 AC069431.2-201ENST00000604149 1099 ntBASIC2.69□□□□□ -1.98
RORAP35398 AL136363.1-201ENST00000605349 337 ntBASIC2.69□□□□□ -1.98
RORAP35398 AL138478.1-201ENST00000612252 832 ntBASIC2.69□□□□□ -1.98
RORAP35398 AC103798.2-201ENST00000624292 632 ntBASIC2.69□□□□□ -1.98
RORAP35398 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.69□□□□□ -1.98
RORAP35398 TPTE2P4-201ENST00000258589 1605 ntBASIC2.68□□□□□ -1.98
RORAP35398 TAB3P1-202ENST00000452645 1634 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms